RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 HOXC10Q9NYD6 342 aa16.94■□□□□ 0.3
SMG1-213ENST00000567737 SAP30BPQ9UHR5 308 aaKnown RBP16.94■□□□□ 0.3
SMG1-213ENST00000567737 COG5Q9UP83 839 aa16.94■□□□□ 0.3
SMG1-213ENST00000567737 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
SMG1-213ENST00000567737 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
SMG1-213ENST00000567737 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
SMG1-213ENST00000567737 GTPBP6O43824 516 aaPredicted RBP16.93■□□□□ 0.3
SMG1-213ENST00000567737 PLS1Q14651 629 aa16.93■□□□□ 0.3
SMG1-213ENST00000567737 COG2Q14746 738 aa16.93■□□□□ 0.3
SMG1-213ENST00000567737 NAA16Q6N069 864 aaPredicted RBP16.93■□□□□ 0.3
SMG1-213ENST00000567737 PPP1R12CQ9BZL4 782 aa16.93■□□□□ 0.3
SMG1-213ENST00000567737 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 TLL1O43897 1013 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 FGBP02675 491 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 FCER1AP12319 257 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 GORABQ5T7V8 394 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 ACER1Q8TDN7 264 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 NEUROD6Q96NK8 337 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 IL23AQ9NPF7 189 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
SMG1-213ENST00000567737 PRR33A8MZF0 331 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
SMG1-213ENST00000567737 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
SMG1-213ENST00000567737 PPP4CP60510 307 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 TATDN1Q6P1N9 297 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 MB21D1Q8N884 522 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 KHSRPQ92945 711 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMG1-213ENST00000567737 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 TANGO6Q9C0B7 1094 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
SMG1-213ENST00000567737 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
SMG1-213ENST00000567737 ABCB5Q2M3G0 1257 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 MRPL50Q8N5N7 158 aaKnown RBP16.9■□□□□ 0.3
SMG1-213ENST00000567737 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 LENG1Q96BZ8 264 aaPredicted RBP16.9■□□□□ 0.3
SMG1-213ENST00000567737 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 COPRSQ9NQ92 184 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 ELP1O95163 1332 aa16.9■□□□□ 0.3
SMG1-213ENST00000567737 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.3
SMG1-213ENST00000567737 REV3LO60673 3130 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 ZNF865P0CJ78 1059 aaPredicted RBP16.89■□□□□ 0.29
SMG1-213ENST00000567737 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
SMG1-213ENST00000567737 RABGGTBP53611 331 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 TFCP2Q12800 502 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 KCNA10Q16322 511 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
SMG1-213ENST00000567737 HLA-CQ95604 372 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 CNPY2Q9Y2B0 182 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 MTCH2Q9Y6C9 303 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 LRRC37A2A6NM11 1700 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
SMG1-213ENST00000567737 C19orf67A6NJJ6 358 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
SMG1-213ENST00000567737 POU3F3P20264 500 aaPredicted RBP16.88■□□□□ 0.29
SMG1-213ENST00000567737 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
SMG1-213ENST00000567737 CDK7P50613 346 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 OTOP2Q7RTS6 562 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 KLHDC9Q8NEP7 349 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 MMP19Q99542 508 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 SERPINB13Q9UIV8 391 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 HDAC5Q9UQL6 1122 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 PCDHA11Q9Y5I1 949 aa16.88■□□□□ 0.29
SMG1-213ENST00000567737 SMCHD1A6NHR9 2005 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
SMG1-213ENST00000567737 ARVCFO00192 962 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 MYOGP15173 224 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 CYP2C18P33260 490 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
SMG1-213ENST00000567737 SLC4A7Q9Y6M7 1214 aa16.87■□□□□ 0.29
SMG1-213ENST00000567737 SLC25A27O95847 323 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 PGK2P07205 417 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 UQCRFS1P1P0C7P4 283 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 MCAMP43121 646 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 NHLH1Q02575 133 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
SMG1-213ENST00000567737 ADGRA1Q86SQ6 560 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 FAM126BQ8IXS8 530 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 PCSK9Q8NBP7 692 aaKnown RBP16.86■□□□□ 0.29
SMG1-213ENST00000567737 UIMC1Q96RL1 719 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 EHD4Q9H223 541 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 FAM184BQ9ULE4 1060 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 GBF1Q92538 1859 aa16.86■□□□□ 0.29
SMG1-213ENST00000567737 A0A0G2JMZ2 1700 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 FOCADQ5VW36 1801 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 RFXAPO00287 272 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 ASGR1P07306 291 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 USP5P45974 858 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 KCTD2Q14681 263 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 ZNF792Q3KQV3 632 aa16.85■□□□□ 0.29
SMG1-213ENST00000567737 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 FLOT1O75955 427 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 C6orf222P0C671 652 aaPredicted RBP16.84■□□□□ 0.29
SMG1-213ENST00000567737 CST5P28325 142 aaPredicted RBP16.84■□□□□ 0.29
SMG1-213ENST00000567737 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
SMG1-213ENST00000567737 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms