RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH3-206ENST00000567674 UNC93B1Q9H1C4 597 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 PORCNQ9H237 461 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 EPB41L4AQ9HCS5 686 aaPredicted RBP13.31□□□□□ -0.28
CDH3-206ENST00000567674 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
CDH3-206ENST00000567674 F5H6K3 240 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 M0R2C6 588 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 ORC4O43929 436 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 FLOT1O75955 427 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 TFRCP02786 760 aaKnown RBP13.3□□□□□ -0.28
CDH3-206ENST00000567674 CHGBP05060 677 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 ELNP15502 786 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 NOVP48745 357 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 OAZ1P54368 228 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 KLRC3Q07444 240 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 PPARAQ07869 468 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 MFSD14CQ5VZR4 134 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
CDH3-206ENST00000567674 OTUD7AQ8TE49 926 aaPredicted RBP13.3□□□□□ -0.28
CDH3-206ENST00000567674 SHISA4Q96DD7 197 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 OGDHLQ9ULD0 1010 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 PPP1R9AQ9ULJ8 1098 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 STXBP5LQ9Y2K9 1186 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 MYH8P13535 1937 aa13.3□□□□□ -0.28
CDH3-206ENST00000567674 BAZ2AQ9UIF9 1905 aaKnown RBP13.3□□□□□ -0.28
CDH3-206ENST00000567674 ZSWIM8A7E2V4 1837 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
CDH3-206ENST00000567674 DOCK3Q8IZD9 2030 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 CYP2B6P20813 491 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 EVX2Q03828 476 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 TRIB2Q92519 343 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 MOV10L1Q9BXT6 1211 aaKnown RBP13.29□□□□□ -0.28
CDH3-206ENST00000567674 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 FEM1BQ9UK73 627 aa13.29□□□□□ -0.28
CDH3-206ENST00000567674 UNC80Q8N2C7 3258 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 ZNF236Q9UL36 1845 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 VWA5AO00534 786 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 FCER1AP12319 257 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 PLEKHM2Q8IWE5 1019 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 CHURC1Q8WUH1 139 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 GMCL1Q96IK5 515 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 SEC62Q99442 399 aaKnown RBP13.28□□□□□ -0.28
CDH3-206ENST00000567674 LNPKQ9C0E8 428 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 PNMA2Q9UL42 364 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDH3-206ENST00000567674 CEP290O15078 2479 aa13.28□□□□□ -0.28
CDH3-206ENST00000567674 FARP2O94887 1054 aaPredicted RBP13.27□□□□□ -0.29
CDH3-206ENST00000567674 IGHDP01880 384 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 PRKAR2AP13861 404 aaKnown RBP13.27□□□□□ -0.29
CDH3-206ENST00000567674 ERCC3P19447 782 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 STAT3P40763 770 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 ATP2B2Q01814 1243 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 KIAA1755Q5JYT7 1200 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 DPP9Q86TI2 863 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 DEFB123Q8N688 67 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 EXOC6Q8TAG9 804 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 TTC14Q96N46 770 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 SLF1Q9BQI6 1058 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 MAF1Q9H063 256 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 RNF41Q9H4P4 317 aaPredicted RBP13.27□□□□□ -0.29
CDH3-206ENST00000567674 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 FBXO40Q9UH90 709 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 A0A0G2JMZ2 1700 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 PLXNB2O15031 1838 aa13.27□□□□□ -0.29
CDH3-206ENST00000567674 ZBED4O75132 1171 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 FGAP02671 866 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
CDH3-206ENST00000567674 TFAP4Q01664 338 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
CDH3-206ENST00000567674 RLFQ13129 1914 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 TMEM132BQ14DG7 1078 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
CDH3-206ENST00000567674 ZNF214Q9UL59 606 aaPredicted RBP13.26□□□□□ -0.29
CDH3-206ENST00000567674 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
CDH3-206ENST00000567674 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 TSPY2A6NKD2 308 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 FOXP2O15409 715 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 NDUFB10O96000 172 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 SDSP20132 328 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 ADORA2AP29274 412 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 LHX8Q68G74 356 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
CDH3-206ENST00000567674 SPICE1Q8N0Z3 855 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms