RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 CCAR1Q8IX12 1150 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 TRMT44Q8IYL2 757 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 PAGR1Q9BTK6 254 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 KIAA1683Q9H0B3 1180 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 CHMP4BQ9H444 224 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 RBM27Q9P2N5 1060 aaKnown RBP11.12□□□□□ -0.63
CDH13-210ENST00000567445 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
CDH13-210ENST00000567445 ZNF532Q9HCE3 1301 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 TCRBV5S4A2TA0A5A2 114 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 GABPAQ06546 454 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 MAP3K21Q5TCX8 1036 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 GPR142Q7Z601 462 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 NECAB2Q7Z6G3 386 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
CDH13-210ENST00000567445 USP6NLQ92738 828 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 DDX12PQ92771 950 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 PORCNQ9H237 461 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 MCM9Q9NXL9 1143 aa11.11□□□□□ -0.63
CDH13-210ENST00000567445 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 ZKSCAN1P17029 563 aaPredicted RBP11.1□□□□□ -0.63
CDH13-210ENST00000567445 VCAM1P19320 739 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 GUCY1A2P33402 732 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 RGS2P41220 211 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 CCNA1P78396 465 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 MORN1Q5T089 497 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 CATSPERGQ6ZRH7 1159 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 PLEKHH3Q7Z736 793 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 RCAN3Q9UKA8 241 aa11.1□□□□□ -0.63
CDH13-210ENST00000567445 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 CNMDO75829 334 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 COL9A1P20849 921 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 SEPT2Q15019 361 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 C6orf132Q5T0Z8 1188 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 LBX2Q6XYB7 198 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 LCORLQ8N3X6 602 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 EDC3Q96F86 508 aaKnown RBP11.09□□□□□ -0.63
CDH13-210ENST00000567445 APBA2Q99767 749 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 PRO3102Q9H379 93 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
CDH13-210ENST00000567445 DCP1AQ9NPI6 582 aaPredicted RBP11.09□□□□□ -0.63
CDH13-210ENST00000567445 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 OGDHLQ9ULD0 1010 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
CDH13-210ENST00000567445 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
CDH13-210ENST00000567445 GLRX3O76003 335 aaKnown RBP11.08□□□□□ -0.64
CDH13-210ENST00000567445 ATP5JP18859 108 aa11.08□□□□□ -0.64
CDH13-210ENST00000567445 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
CDH13-210ENST00000567445 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDH13-210ENST00000567445 BOLA2Q9H3K6 86 aa11.08□□□□□ -0.64
CDH13-210ENST00000567445 RPAP3Q9H6T3 665 aaPredicted RBP11.08□□□□□ -0.64
CDH13-210ENST00000567445 ARMT1Q9H993 441 aa11.08□□□□□ -0.64
CDH13-210ENST00000567445 A0A1W2PRG0 241 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
CDH13-210ENST00000567445 MBD4O95243 580 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 CYP2D6P10635 497 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 ADD2P35612 726 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 CCL14Q16627 93 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 HAUS7Q99871 368 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 SWAP70Q9UH65 585 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 ALPK3Q96L96 1907 aa11.07□□□□□ -0.64
CDH13-210ENST00000567445 A0A1W2PPC1 479 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 SLC15A5A6NIM6 579 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 PRKAB2O43741 272 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 COG2Q14746 738 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 PROX2Q3B8N5 592 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 WDR78Q5VTH9 848 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 LRRCC1Q9C099 1032 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 C11orf49Q9H6J7 331 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 ATP8A2Q9NTI2 1148 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 HOXC10Q9NYD6 342 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 CCND3P30281 292 aaPredicted RBP11.06□□□□□ -0.64
CDH13-210ENST00000567445 GRB14Q14449 540 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 C20orf194Q5TEA3 1177 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 C7orf61Q8IZ16 206 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 ARID3AQ99856 593 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 TANGO6Q9C0B7 1094 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 STAP2Q9UGK3 403 aa11.06□□□□□ -0.64
CDH13-210ENST00000567445 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
CDH13-210ENST00000567445 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
CDH13-210ENST00000567445 HOXC6P09630 235 aa11.05□□□□□ -0.64
CDH13-210ENST00000567445 AKR1B1P15121 316 aa11.05□□□□□ -0.64
CDH13-210ENST00000567445 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
CDH13-210ENST00000567445 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
CDH13-210ENST00000567445 ZSCAN25Q6NSZ9 544 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms