RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 SHCBP1Q8NEM2 672 aa18.32■□□□□ 0.52
CDR2-206ENST00000567406 OTUD7AQ8TE49 926 aaPredicted RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 ARPP21Q9UBL0 812 aaPredicted RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 COL11A1P12107 1806 aaPredicted RBP18.32■□□□□ 0.52
CDR2-206ENST00000567406 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 PRDM1O75626 825 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 PGK2P07205 417 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 BMP8BP34820 402 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
CDR2-206ENST00000567406 APPBP2Q92624 585 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 MKNK2Q9HBH9 465 aa18.31■□□□□ 0.52
CDR2-206ENST00000567406 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
CDR2-206ENST00000567406 ZNFX1Q9P2E3 1918 aaKnown RBP18.31■□□□□ 0.52
CDR2-206ENST00000567406 COL6A3P12111 3177 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 GPAA1O43292 621 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 OLFML2BQ68BL8 750 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 SEC62Q99442 399 aaKnown RBP18.3■□□□□ 0.52
CDR2-206ENST00000567406 MROH8Q9H579 483 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 GOPCQ9HD26 462 aa18.3■□□□□ 0.52
CDR2-206ENST00000567406 VWA5AO00534 786 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 APPP05067 770 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 FCER1AP12319 257 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 MAML3Q96JK9 1138 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 MMP19Q99542 508 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 UBE2OQ9C0C9 1292 aaKnown RBP18.29■□□□□ 0.52
CDR2-206ENST00000567406 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
CDR2-206ENST00000567406 LAMA2P24043 3122 aaKnown RBP18.28■□□□□ 0.52
CDR2-206ENST00000567406 MSCO60682 206 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 STAT3P40763 770 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 TDO2P48775 406 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
CDR2-206ENST00000567406 DNM1LO00429 736 aa18.27■□□□□ 0.52
CDR2-206ENST00000567406 SLC25A27O95847 323 aa18.27■□□□□ 0.52
CDR2-206ENST00000567406 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
CDR2-206ENST00000567406 Q7L0L9 218 aa18.27■□□□□ 0.52
CDR2-206ENST00000567406 ABRAQ8N0Z2 381 aa18.27■□□□□ 0.52
CDR2-206ENST00000567406 REPS2Q8NFH8 660 aa18.27■□□□□ 0.52
CDR2-206ENST00000567406 F5H6K3 240 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 SEPT4O43236 478 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 NDUFB10O96000 172 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 RTP1P59025 263 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 KLRC3Q07444 240 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 GIMAP6Q6P9H5 292 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 RIOX2Q8IUF8 465 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 IFNL3Q8IZI9 196 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 TDHQ8IZJ6 230 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 PI4K2BQ8TCG2 481 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 FERMT2Q96AC1 680 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 SLC5A4Q9NY91 659 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 ZNF214Q9UL59 606 aaPredicted RBP18.26■□□□□ 0.51
CDR2-206ENST00000567406 ATP11BQ9Y2G3 1177 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 RIPK3Q9Y572 518 aa18.26■□□□□ 0.51
CDR2-206ENST00000567406 GREB1LQ9C091 1923 aaPredicted RBP18.25■□□□□ 0.51
CDR2-206ENST00000567406 PATL2C9JE40 543 aaKnown RBP18.25■□□□□ 0.51
CDR2-206ENST00000567406 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
CDR2-206ENST00000567406 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
CDR2-206ENST00000567406 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
CDR2-206ENST00000567406 FSD1Q9BTV5 496 aa18.25■□□□□ 0.51
CDR2-206ENST00000567406 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
CDR2-206ENST00000567406 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 ADCYAP1R1P41586 468 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 KCTD2Q14681 263 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 LRRC41Q15345 812 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 ZNF792Q3KQV3 632 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 SLC39A5Q6ZMH5 540 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 CCDC129Q6ZRS4 1044 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 CPXCR1Q8N123 301 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 LRRC47Q8N1G4 583 aaKnown RBP18.24■□□□□ 0.51
CDR2-206ENST00000567406 ARRDC4Q8NCT1 418 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
CDR2-206ENST00000567406 CEP95Q96GE4 821 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 SLF1Q9BQI6 1058 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
CDR2-206ENST00000567406 KBTBD13C9JR72 458 aa18.23■□□□□ 0.51
CDR2-206ENST00000567406 GNAT2P19087 354 aa18.23■□□□□ 0.51
CDR2-206ENST00000567406 SNRNP48Q6IEG0 339 aaKnown RBP18.23■□□□□ 0.51
CDR2-206ENST00000567406 KIFC2Q96AC6 838 aa18.23■□□□□ 0.51
CDR2-206ENST00000567406 MYH4Q9Y623 1939 aa18.23■□□□□ 0.51
CDR2-206ENST00000567406 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
CDR2-206ENST00000567406 PLXNA1Q9UIW2 1896 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 ERC2O15083 957 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 PGK1P00558 417 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 LRIT3Q3SXY7 679 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 CRBNQ96SW2 442 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 TINF2Q9BSI4 451 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 RAVER2Q9HCJ3 691 aaKnown RBP18.22■□□□□ 0.51
CDR2-206ENST00000567406 MTMR4Q9NYA4 1195 aa18.22■□□□□ 0.51
CDR2-206ENST00000567406 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
CDR2-206ENST00000567406 ZMYM1Q5SVZ6 1142 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms