RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DLG4P78352 724 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 SNX17Q15036 470 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 ADGRF1Q5T601 910 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 RNF111Q6ZNA4 994 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 ENOX1Q8TC92 643 aaKnown RBP5.97□□□□□ -1.45
CDH1-211ENST00000567320 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDH1-211ENST00000567320 GMIPQ9P107 970 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 EBF1Q9UH73 591 aa5.97□□□□□ -1.45
CDH1-211ENST00000567320 SYPP08247 313 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 ERCC3P19447 782 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 POLR2BP30876 1174 aaKnown RBP5.96□□□□□ -1.46
CDH1-211ENST00000567320 CEP128Q6ZU80 1094 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 TMC3Q7Z5M5 1100 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 SYTL5Q8TDW5 730 aaPredicted RBP5.96□□□□□ -1.46
CDH1-211ENST00000567320 TCTN2Q96GX1 697 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 SGPP1Q9BX95 441 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 GZF1Q9H116 711 aaPredicted RBP5.96□□□□□ -1.46
CDH1-211ENST00000567320 GGT7Q9UJ14 662 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 TCFL5Q9UL49 500 aa5.96□□□□□ -1.46
CDH1-211ENST00000567320 CNOT6Q9ULM6 557 aaKnown RBP5.96□□□□□ -1.46
CDH1-211ENST00000567320 ROBO2Q9HCK4 1378 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 MYOCOSA0A1B0GUC4 107 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 OR14I1A6ND48 311 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 MEIS1O00470 390 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 SEMA7AO75326 666 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 UBOX5O94941 541 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 INHBBP09529 407 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 GARTP22102 1010 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 SEZ6Q53EL9 994 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 OVOS1Q6IE37 1185 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 GK5Q6ZS86 529 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 AMIGO3Q86WK7 504 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 USHBP1Q8N6Y0 703 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 DAGLBQ8NCG7 672 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 ZNF296Q8WUU4 475 aaPredicted RBP5.95□□□□□ -1.46
CDH1-211ENST00000567320 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 ZNF512BQ96KM6 892 aaPredicted RBP5.95□□□□□ -1.46
CDH1-211ENST00000567320 HDAC8Q9BY41 377 aa5.95□□□□□ -1.46
CDH1-211ENST00000567320 ZNF552Q9H707 407 aaPredicted RBP5.95□□□□□ -1.46
CDH1-211ENST00000567320 PEX10O60683 326 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 CLEC3AO75596 197 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 RAD51AP2Q09MP3 1159 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 ZNF326Q5BKZ1 582 aaKnown RBP5.94□□□□□ -1.46
CDH1-211ENST00000567320 NBPF12Q5TAG4 269 aaPredicted RBP5.94□□□□□ -1.46
CDH1-211ENST00000567320 HS2ST1Q7LGA3 356 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 ERMP1Q7Z2K6 904 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 ZNF655Q8N720 491 aaPredicted RBP5.94□□□□□ -1.46
CDH1-211ENST00000567320 BCL2L13Q9BXK5 485 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 MKRN2Q9H000 416 aaKnown RBP5.94□□□□□ -1.46
CDH1-211ENST00000567320 SIRT5Q9NXA8 310 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 FBXL21Q9UKT6 434 aa5.94□□□□□ -1.46
CDH1-211ENST00000567320 TEX51A0A1B0GUA7 166 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 RFXAPO00287 272 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 PRAMEF1O95521 474 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 BMP7P18075 431 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CDH1-211ENST00000567320 APOBRQ0VD83 1088 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 SNW1Q13573 536 aaKnown RBP5.93□□□□□ -1.46
CDH1-211ENST00000567320 NBPF9Q3BBW0 867 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 ZNF385BQ569K4 471 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 TTLL10Q6ZVT0 673 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 VWCEQ96DN2 955 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 MAP6Q96JE9 813 aa5.93□□□□□ -1.46
CDH1-211ENST00000567320 SDHBP21912 280 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 KIR2DL1P43626 348 aaPredicted RBP5.92□□□□□ -1.46
CDH1-211ENST00000567320 KIR2DL2P43627 348 aaPredicted RBP5.92□□□□□ -1.46
CDH1-211ENST00000567320 CRKP46108 304 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 CTSWP56202 376 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 RTP1P59025 263 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 ZPBP2Q6X784 338 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 NLRC3Q7RTR2 1065 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 GIPC2Q8TF65 315 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 SHISA4Q96DD7 197 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 G6PC3Q9BUM1 346 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 CDADC1Q9BWV3 514 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 LRRC3Q9BY71 257 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 PRDM14Q9GZV8 571 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 ZCCHC4Q9H5U6 513 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 KCTD3Q9Y597 815 aa5.92□□□□□ -1.46
CDH1-211ENST00000567320 FAM86C2PA6NEL3 165 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 NRDCO43847 1150 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 GREM1O60565 184 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 ATE1O95260 518 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 ZNF165P49910 485 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 CLCQ05315 142 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 TCERG1LQ5VWI1 586 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 LINC00116Q8NCU8 138 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 HHIPL1Q96JK4 782 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 CNNM2Q9H8M5 875 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 CHST7Q9NS84 486 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 MINPP1Q9UNW1 487 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 IRAK3Q9Y616 596 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 TAF6LQ9Y6J9 622 aa5.91□□□□□ -1.46
CDH1-211ENST00000567320 TMEM82A0PJX8 343 aa5.9□□□□□ -1.46
CDH1-211ENST00000567320 B8ZZF3 427 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms