RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 PGK2P07205 417 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 ITGB8P26012 769 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 TMEM132BQ14DG7 1078 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 TTF1Q15361 905 aaPredicted RBP18.73■□□□□ 0.59
PALB2-205ENST00000567003 TMED8Q6PL24 325 aaPredicted RBP18.73■□□□□ 0.59
PALB2-205ENST00000567003 MB21D1Q8N884 522 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 MYLIPQ8WY64 445 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 LENG1Q96BZ8 264 aaPredicted RBP18.73■□□□□ 0.59
PALB2-205ENST00000567003 TTYH1Q9H313 450 aaPredicted RBP18.73■□□□□ 0.59
PALB2-205ENST00000567003 MROH8Q9H579 483 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 VCPKMTQ9H867 229 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
PALB2-205ENST00000567003 MBD4O95243 580 aa18.72■□□□□ 0.59
PALB2-205ENST00000567003 TAL1P17542 331 aaPredicted RBP18.72■□□□□ 0.59
PALB2-205ENST00000567003 TLE2Q04725 743 aa18.72■□□□□ 0.59
PALB2-205ENST00000567003 MAFAQ8NHW3 353 aaPredicted RBP18.72■□□□□ 0.59
PALB2-205ENST00000567003 ARHGEF10LQ9HCE6 1279 aa18.72■□□□□ 0.59
PALB2-205ENST00000567003 TMX2Q9Y320 296 aa18.72■□□□□ 0.59
PALB2-205ENST00000567003 FCER1AP12319 257 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 EPHB4P54760 987 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 ABRAQ8N0Z2 381 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 MMP19Q99542 508 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 SLC5A4Q9NY91 659 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 SWAP70Q9UH65 585 aa18.71■□□□□ 0.59
PALB2-205ENST00000567003 PGK1P00558 417 aa18.7■□□□□ 0.58
PALB2-205ENST00000567003 XPNPEP3Q9NQH7 507 aa18.7■□□□□ 0.58
PALB2-205ENST00000567003 PHF24Q9UPV7 400 aa18.7■□□□□ 0.58
PALB2-205ENST00000567003 TTC28Q96AY4 2481 aa18.69■□□□□ 0.58
PALB2-205ENST00000567003 WDR46O15213 610 aaKnown RBP18.69■□□□□ 0.58
PALB2-205ENST00000567003 CDK8P49336 464 aa18.69■□□□□ 0.58
PALB2-205ENST00000567003 RAD21O60216 631 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 PQBP1O60828 265 aaKnown RBP18.68■□□□□ 0.58
PALB2-205ENST00000567003 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
PALB2-205ENST00000567003 RARBP10826 455 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
PALB2-205ENST00000567003 ADD2P35612 726 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 SMAD3P84022 425 aaKnown RBP18.68■□□□□ 0.58
PALB2-205ENST00000567003 HNRNPUQ00839 825 aaKnown RBP eCLIP18.68■□□□□ 0.58
PALB2-205ENST00000567003 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
PALB2-205ENST00000567003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.68■□□□□ 0.58
PALB2-205ENST00000567003 BOLA2Q9H3K6 86 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 MYH7P12883 1935 aa18.68■□□□□ 0.58
PALB2-205ENST00000567003 A0A1W2PQ45 241 aaPredicted RBP18.67■□□□□ 0.58
PALB2-205ENST00000567003 A0A1W2PQY0 241 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 USP17L12C9JPN9 530 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 USP17L21D6R901 530 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 SLC25A27O95847 323 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 CLTBP09497 229 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 ZNF792Q3KQV3 632 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 HSP90AB4PQ58FF6 505 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 C12orf60Q5U649 245 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 C1orf53Q5VUE5 145 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 RIOX2Q8IUF8 465 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 KIF1BPQ96EK5 621 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 RNPC3Q96LT9 517 aaKnown RBP18.67■□□□□ 0.58
PALB2-205ENST00000567003 TINF2Q9BSI4 451 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 PAG1Q9NWQ8 432 aa18.67■□□□□ 0.58
PALB2-205ENST00000567003 ZNF865P0CJ78 1059 aaPredicted RBP18.66■□□□□ 0.58
PALB2-205ENST00000567003 FOSL2P15408 326 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 C16orf86Q6ZW13 317 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 SIRT2Q8IXJ6 389 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 REPS2Q8NFH8 660 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
PALB2-205ENST00000567003 ATP8A2Q9NTI2 1148 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 PPP1R9AQ9ULJ8 1098 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 ADAMTS5Q9UNA0 930 aa18.66■□□□□ 0.58
PALB2-205ENST00000567003 VWA5AO00534 786 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 STAT3P40763 770 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 KCTD2Q14681 263 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 RNF180Q86T96 592 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 CCDC17Q96LX7 622 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 ZNF214Q9UL59 606 aaPredicted RBP18.65■□□□□ 0.58
PALB2-205ENST00000567003 TACC3Q9Y6A5 838 aa18.65■□□□□ 0.58
PALB2-205ENST00000567003 KIAA0355O15063 1070 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 ADAMTS4O75173 837 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 RAG1P15918 1043 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.57
PALB2-205ENST00000567003 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.57
PALB2-205ENST00000567003 TMEM39AQ9NV64 488 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 NRBP1Q9UHY1 535 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 ROBO3Q96MS0 1386 aa18.64■□□□□ 0.57
PALB2-205ENST00000567003 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.57
PALB2-205ENST00000567003 MYADML2A6NDP7 307 aa18.63■□□□□ 0.57
PALB2-205ENST00000567003 AKR1A1P14550 325 aa18.63■□□□□ 0.57
PALB2-205ENST00000567003 CTR9Q6PD62 1173 aa18.63■□□□□ 0.57
PALB2-205ENST00000567003 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
PALB2-205ENST00000567003 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
PALB2-205ENST00000567003 MCM3APO60318 1980 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 MUC3AQ02505 3323 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 SLC4A3P48751 1232 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 FPGSQ05932 587 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 FAAP100Q0VG06 881 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 USP38Q8NB14 1042 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 HAUS7Q99871 368 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 PUS7LQ9H0K6 701 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms