RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 NINJ1Q92982 152 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 ZNF358Q9NW07 568 aa12.47□□□□□ -0.41
UBFD1-205ENST00000566136 TSPAN7P41732 249 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 BAG6P46379 1132 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 KRT24Q2M2I5 525 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 FBXW10Q5XX13 1052 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 MRM1Q6IN84 353 aaKnown RBP12.46□□□□□ -0.41
UBFD1-205ENST00000566136 PDXDC2PQ6P474 469 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 MCM10Q7L590 875 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 CCDC47Q96A33 483 aaKnown RBP12.46□□□□□ -0.41
UBFD1-205ENST00000566136 SLIT3O75094 1523 aa12.46□□□□□ -0.41
UBFD1-205ENST00000566136 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.41
UBFD1-205ENST00000566136 TSPY2A6NKD2 308 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 GSG1L2A8MUP6 293 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 F12P00748 615 aaPredicted RBP12.46□□□□□ -0.42
UBFD1-205ENST00000566136 TSPY3P0CV98 308 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 TSPY8P0CW00 308 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 PMLP29590 882 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 TSPY1Q01534 308 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 AGAP9Q5VTM2 703 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 LYPD8Q6UX82 237 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 HVCN1Q96D96 273 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 VPS45Q9NRW7 570 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 PLAAQ9Y263 795 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.42
UBFD1-205ENST00000566136 KLRG2A4D1S0 409 aaPredicted RBP12.45□□□□□ -0.42
UBFD1-205ENST00000566136 BIRC3Q13489 604 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 LEO1Q8WVC0 666 aaPredicted RBP12.45□□□□□ -0.42
UBFD1-205ENST00000566136 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 ORC4O43929 436 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 PPFIA3O75145 1194 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 GBP2P32456 591 aaPredicted RBP12.45□□□□□ -0.42
UBFD1-205ENST00000566136 NXNQ6DKJ4 435 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 RNF19BQ6ZMZ0 732 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 RPAINQ86UA6 219 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 AXIN2Q9Y2T1 843 aa12.45□□□□□ -0.42
UBFD1-205ENST00000566136 FAM153BP0C7A2 387 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 L1CAMP32004 1257 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 MAPK9P45984 424 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 SRLQ86TD4 932 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 TATDN2Q93075 761 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 SRRTQ9BXP5 876 aaKnown RBP12.44□□□□□ -0.42
UBFD1-205ENST00000566136 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
UBFD1-205ENST00000566136 DGKBQ9Y6T7 804 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 ATICP31939 592 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 HTR3AP46098 478 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 SCTRP47872 440 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 NDUFAF2Q8N183 169 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 ELAC2Q9BQ52 826 aaKnown RBP12.44□□□□□ -0.42
UBFD1-205ENST00000566136 PHTF1Q9UMS5 762 aa12.44□□□□□ -0.42
UBFD1-205ENST00000566136 TTC21AQ8NDW8 1320 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 TMEM127O75204 238 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 TMPRSS15P98073 1019 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 PCNX4Q63HM2 1172 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
UBFD1-205ENST00000566136 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
UBFD1-205ENST00000566136 ZFATQ9P243 1243 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 PSDA5PKW4 1024 aaPredicted RBP12.43□□□□□ -0.42
UBFD1-205ENST00000566136 F5H423 210 aaPredicted RBP12.43□□□□□ -0.42
UBFD1-205ENST00000566136 PPP2R5EQ16537 467 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 LRP10Q7Z4F1 713 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 ARHGEF25Q86VW2 580 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 ZNF69Q9UC07 566 aa12.43□□□□□ -0.42
UBFD1-205ENST00000566136 RGPD1P0DJD0 1748 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ERBB4Q15303 1308 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 CRB1P82279 1406 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 APPP05067 770 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 NCAM1P13591 858 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ID4P47928 161 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 BCAMP50895 628 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 OTOP3Q7RTS5 596 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ARHGAP45Q92619 1136 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 SLC5A4Q9NY91 659 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 COL18A1P39060 1754 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ABCC4O15439 1325 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 ABLIM3O94929 683 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 HOXC13P31276 330 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
UBFD1-205ENST00000566136 FOXB2Q5VYV0 432 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 SH3KBP1Q96B97 665 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 MIS18AQ9NYP9 233 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 RRN3Q9NYV6 651 aa12.42□□□□□ -0.42
UBFD1-205ENST00000566136 FOXD3Q9UJU5 478 aaPredicted RBP12.42□□□□□ -0.42
UBFD1-205ENST00000566136 PYGLP06737 847 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 AMPHP49418 695 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 RAB15P59190 212 aa12.41□□□□□ -0.42
UBFD1-205ENST00000566136 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms