RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 COBLO75128 1261 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 PRDM1O75626 825 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 NACAP1Q9BZK3 213 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 PRO3102Q9H379 93 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 MROH8Q9H579 483 aa18.69■□□□□ 0.58
CDH3-204ENST00000565453 ZBTB47Q9UFB7 747 aaPredicted RBP18.69■□□□□ 0.58
CDH3-204ENST00000565453 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
CDH3-204ENST00000565453 PLIN4Q96Q06 1357 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 FRMPD3Q5JV73 1810 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 F5H6K3 240 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 VWA5AO00534 786 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 EVI5O60447 810 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 NDUFB10O96000 172 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 CYP2C19P33261 490 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 KLRC3Q07444 240 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 PLS1Q14651 629 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 OLFML2BQ68BL8 750 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
CDH3-204ENST00000565453 CHRDL2Q6WN34 429 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 CCDC129Q6ZRS4 1044 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 DPP9Q86TI2 863 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 NCAPG2Q86XI2 1143 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
CDH3-204ENST00000565453 ABRAQ8N0Z2 381 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 TRPV1Q8NER1 839 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 MKL1Q969V6 931 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 EVI5LQ96CN4 794 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 NUP88Q99567 741 aaPredicted RBP18.68■□□□□ 0.58
CDH3-204ENST00000565453 C11orf49Q9H6J7 331 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 PFASO15067 1338 aa18.68■□□□□ 0.58
CDH3-204ENST00000565453 SLC25A27O95847 323 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 COL6A1P12109 1028 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDH3-204ENST00000565453 PPARAQ07869 468 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 RIOX2Q8IUF8 465 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 CEP95Q96GE4 821 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 NAPBQ9H115 298 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 MTMR4Q9NYA4 1195 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 CLIP2Q9UDT6 1046 aa18.67■□□□□ 0.58
CDH3-204ENST00000565453 ZNF214Q9UL59 606 aaPredicted RBP18.67■□□□□ 0.58
CDH3-204ENST00000565453 CEP290O15078 2479 aa18.66■□□□□ 0.58
CDH3-204ENST00000565453 CYBAP13498 195 aa18.66■□□□□ 0.58
CDH3-204ENST00000565453 NEDD1Q8NHV4 660 aa18.66■□□□□ 0.58
CDH3-204ENST00000565453 RBM27Q9P2N5 1060 aaKnown RBP18.66■□□□□ 0.58
CDH3-204ENST00000565453 DDX20Q9UHI6 824 aaKnown RBP18.66■□□□□ 0.58
CDH3-204ENST00000565453 SYNPO2Q9UMS6 1093 aa18.66■□□□□ 0.58
CDH3-204ENST00000565453 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
CDH3-204ENST00000565453 MYH4Q9Y623 1939 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 RAD21O60216 631 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 STAT3P40763 770 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 PDE4BQ07343 736 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 SLF1Q9BQI6 1058 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 LNPKQ9C0E8 428 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 HELLSQ9NRZ9 838 aa18.65■□□□□ 0.58
CDH3-204ENST00000565453 TTLL1O95922 423 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 IGHDP01880 384 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 FCER1AP12319 257 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 TICAM2Q86XR7 235 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 GMCL1P1Q8NEA9 526 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.57
CDH3-204ENST00000565453 TACC3Q9Y6A5 838 aa18.64■□□□□ 0.57
CDH3-204ENST00000565453 A0A0D9SFI3 127 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 MSCO60682 206 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 SLC3A2P08195 630 aaKnown RBP18.63■□□□□ 0.57
CDH3-204ENST00000565453 TFAP4Q01664 338 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 ALX1Q15699 326 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 C7orf61Q8IZ16 206 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
CDH3-204ENST00000565453 MAML3Q96JK9 1138 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 FAM227BQ96M60 508 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 MMP19Q99542 508 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 SLC5A4Q9NY91 659 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 ANAPC4Q9UJX5 808 aa18.63■□□□□ 0.57
CDH3-204ENST00000565453 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 TSPY3P0CV98 308 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 TSPY8P0CW00 308 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 CNGA1P29973 690 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 COPB2P35606 906 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 CTDSPL2Q05D32 466 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 PRPF38AQ8NAV1 312 aaKnown RBP18.62■□□□□ 0.57
CDH3-204ENST00000565453 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
CDH3-204ENST00000565453 ZNFX1Q9P2E3 1918 aaKnown RBP18.62■□□□□ 0.57
CDH3-204ENST00000565453 FGRP09769 529 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 ZNF792Q3KQV3 632 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 MCMDC2Q4G0Z9 681 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 B4GALNT3Q6L9W6 998 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 CHD1LQ86WJ1 897 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 TEX13BQ9BXU2 312 aa18.61■□□□□ 0.57
CDH3-204ENST00000565453 DIS3Q9Y2L1 958 aaKnown RBP18.61■□□□□ 0.57
CDH3-204ENST00000565453 SEPT4O43236 478 aa18.6■□□□□ 0.57
CDH3-204ENST00000565453 PGK2P07205 417 aa18.6■□□□□ 0.57
CDH3-204ENST00000565453 NUCB1Q02818 461 aa18.6■□□□□ 0.57
CDH3-204ENST00000565453 NMIQ13287 307 aaPredicted RBP18.6■□□□□ 0.57
CDH3-204ENST00000565453 KCTD2Q14681 263 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms