RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GIMAP6Q6P9H5 292 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 NCAPG2Q86XI2 1143 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 KBTBD3Q8NAB2 608 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 REPS2Q8NFH8 660 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 MAML3Q96JK9 1138 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 UBE2OQ9C0C9 1292 aaKnown RBP10.31□□□□□ -0.76
CAPN3-213ENST00000565173 SH2D4AQ9H788 454 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 MYH7P12883 1935 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 MYH8P13535 1937 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 VWA5AO00534 786 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 SEPT4O43236 478 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 SLC25A27O95847 323 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 FCER1AP12319 257 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-213ENST00000565173 MDM2Q00987 491 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-213ENST00000565173 GJC2Q5T442 439 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-213ENST00000565173 ANO1Q5XXA6 986 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 RIOX2Q8IUF8 465 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 AMOTL1Q8IY63 956 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 ARRDC4Q8NCT1 418 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 ARPP21Q9UBL0 812 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-213ENST00000565173 ZNF214Q9UL59 606 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-213ENST00000565173 PPP1R9AQ9ULJ8 1098 aa10.3□□□□□ -0.76
CAPN3-213ENST00000565173 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 COL11A1P12107 1806 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 IGKV6D-41A0A0C4DH26 115 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 RNF113AO15541 343 aaKnown RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 PGK2P07205 417 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 ZNF792Q3KQV3 632 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 FAM83BQ5T0W9 1011 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 SLC39A5Q6ZMH5 540 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 Q7L0L9 218 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 APPBP2Q92624 585 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 NUP88Q99567 741 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 GOPCQ9HD26 462 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 SLC5A4Q9NY91 659 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 NYAP2Q9P242 653 aa10.29□□□□□ -0.76
CAPN3-213ENST00000565173 ZNFX1Q9P2E3 1918 aaKnown RBP10.29□□□□□ -0.76
CAPN3-213ENST00000565173 ROBO3Q96MS0 1386 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 F5H6K3 240 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 M0R2C6 588 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 GPAA1O43292 621 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 TAL1P17542 331 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-213ENST00000565173 STAT3P40763 770 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 RTP1P59025 263 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 KLRC3Q07444 240 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 SNX17Q15036 470 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 LRRC41Q15345 812 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
CAPN3-213ENST00000565173 STK11IPQ8N1F8 1099 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 MKL1Q969V6 931 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 MMP19Q99542 508 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 NRBP1Q9UHY1 535 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
CAPN3-213ENST00000565173 RIPK3Q9Y572 518 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 VCANP13611 3396 aa10.28□□□□□ -0.76
CAPN3-213ENST00000565173 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 MINDY4BA8MYZ0 360 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 PATL2C9JE40 543 aaKnown RBP10.27□□□□□ -0.77
CAPN3-213ENST00000565173 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 NDUFB10O96000 172 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 ZFYP08048 801 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-213ENST00000565173 ZNF865P0CJ78 1059 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-213ENST00000565173 ADCYAP1R1P41586 468 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 FAM47AQ5JRC9 791 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 C1orf53Q5VUE5 145 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 OTUD7AQ8TE49 926 aaPredicted RBP10.27□□□□□ -0.77
CAPN3-213ENST00000565173 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
CAPN3-213ENST00000565173 TINF2Q9BSI4 451 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 MKNK2Q9HBH9 465 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 MTMR10Q9NXD2 777 aa10.27□□□□□ -0.77
CAPN3-213ENST00000565173 SMCHD1A6NHR9 2005 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 DNAJC25-GNG10A0A024R161 153 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 KBTBD13C9JR72 458 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 ATP2A1O14983 1001 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 GNAT2P19087 354 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 KCTD2Q14681 263 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 IFNL3Q8IZI9 196 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 PRPF38AQ8NAV1 312 aaKnown RBP10.26□□□□□ -0.77
CAPN3-213ENST00000565173 CEP95Q96GE4 821 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 GPATCH3Q96I76 525 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 LBHD1Q9BQE6 289 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-213ENST00000565173 SLF1Q9BQI6 1058 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 MTMR4Q9NYA4 1195 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 ATP11BQ9Y2G3 1177 aa10.26□□□□□ -0.77
CAPN3-213ENST00000565173 TRIM43BA6NCK2 446 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 RAD21O60216 631 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 PRDM1O75626 825 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 SNAI1O95863 264 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-213ENST00000565173 ITGB8P26012 769 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 COPB2P35606 906 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 TDO2P48775 406 aa10.25□□□□□ -0.77
CAPN3-213ENST00000565173 TRIM60Q495X7 471 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms