RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 DCAF15Q66K64 600 aa13□□□□□ -0.33
SNX29-204ENST00000564791 GMCL1P1Q8NEA9 526 aa13□□□□□ -0.33
SNX29-204ENST00000564791 ACER1Q8TDN7 264 aa13□□□□□ -0.33
SNX29-204ENST00000564791 DCAF4Q8WV16 495 aa13□□□□□ -0.33
SNX29-204ENST00000564791 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
SNX29-204ENST00000564791 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
SNX29-204ENST00000564791 ARHGEF10LQ9HCE6 1279 aa13□□□□□ -0.33
SNX29-204ENST00000564791 NDUFB10O96000 172 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 VEGFAP15692 232 aaPredicted RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 XBP1P17861 261 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 SMARCA1P28370 1054 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 EPHX2P34913 555 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 ECE1P42892 770 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 KRT85P78386 507 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 TTBK2Q6IQ55 1244 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 KCTD1Q719H9 257 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 GPKOWQ92917 476 aaPredicted RBP eCLIP12.99□□□□□ -0.33
SNX29-204ENST00000564791 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 ZNF341Q9BYN7 854 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 SYNPO2Q9UMS6 1093 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 ADM5C9JUS6 153 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 F5H6K3 240 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 ASNSP08243 561 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 SLC1A4P43007 532 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 KLRC3Q07444 240 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX29-204ENST00000564791 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 BRAPQ7Z569 592 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 DIS3L2Q8IYB7 885 aaKnown RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 PHF20Q9BVI0 1012 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 RIOX1Q9H6W3 641 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 VAT1LQ9HCJ6 419 aa12.99□□□□□ -0.33
SNX29-204ENST00000564791 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 ISY1Q9ULR0 285 aaKnown RBP12.99□□□□□ -0.33
SNX29-204ENST00000564791 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
SNX29-204ENST00000564791 U2AF2P26368 475 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNX29-204ENST00000564791 INPP5BP32019 993 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 GNL2Q13823 731 aaKnown RBP12.98□□□□□ -0.33
SNX29-204ENST00000564791 WWC2Q6AWC2 1192 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 RRP36Q96EU6 259 aaKnown RBP12.98□□□□□ -0.33
SNX29-204ENST00000564791 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 PIGSQ96S52 555 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
SNX29-204ENST00000564791 ZNF112Q9UJU3 913 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 TMX2Q9Y320 296 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 OTOFQ9HC10 1997 aa12.98□□□□□ -0.33
SNX29-204ENST00000564791 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 BTBD18B2RXH4 712 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 TRAK2O60296 914 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 SLC16A2P36021 539 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 NPY5RQ15761 445 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 KIAA1755Q5JYT7 1200 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 MYSM1Q5VVJ2 828 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 DLK2Q6UY11 383 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 HEATR3Q7Z4Q2 680 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 OXER1Q8TDS5 423 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 ZNF396Q96N95 335 aaPredicted RBP12.97□□□□□ -0.33
SNX29-204ENST00000564791 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
SNX29-204ENST00000564791 FTOQ9C0B1 505 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNX29-204ENST00000564791 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
SNX29-204ENST00000564791 GINM1Q9NU53 330 aa12.97□□□□□ -0.33
SNX29-204ENST00000564791 SEC63Q9UGP8 760 aaKnown RBP12.97□□□□□ -0.33
SNX29-204ENST00000564791 POTECB2RU33 542 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 STXBP3O00186 592 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
SNX29-204ENST00000564791 KRT2P35908 639 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 NR5A1Q13285 461 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.33
SNX29-204ENST00000564791 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 KRT26Q7Z3Y9 468 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 ADGRF4Q8IZF3 695 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 SPICE1Q8N0Z3 855 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 USP28Q96RU2 1077 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 FOXP1Q9H334 677 aaPredicted RBP12.96□□□□□ -0.33
SNX29-204ENST00000564791 SH2D4AQ9H788 454 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 JMJD4Q9H9V9 463 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 SH3GLB2Q9NR46 395 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 BARHL2Q9NY43 387 aa12.96□□□□□ -0.33
SNX29-204ENST00000564791 IQCA1LA6NCM1 817 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 BMP3P12645 472 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 NLRP5P59047 1200 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
SNX29-204ENST00000564791 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 EAPPQ56P03 285 aaPredicted RBP12.95□□□□□ -0.34
SNX29-204ENST00000564791 ATL3Q6DD88 541 aa12.95□□□□□ -0.34
SNX29-204ENST00000564791 SCYL3Q8IZE3 742 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms