RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 TMC3Q7Z5M5 1100 aa7.09□□□□□ -1.27
CDH1-207ENST00000564745 LRRN4CLQ8ND94 238 aa7.09□□□□□ -1.27
CDH1-207ENST00000564745 ZNF669Q96BR6 464 aaPredicted RBP7.09□□□□□ -1.27
CDH1-207ENST00000564745 PRDM5Q9NQX1 630 aaPredicted RBP7.09□□□□□ -1.27
CDH1-207ENST00000564745 ARHGEF4Q9NR80 690 aa7.09□□□□□ -1.27
CDH1-207ENST00000564745 FBXL21Q9UKT6 434 aa7.09□□□□□ -1.27
CDH1-207ENST00000564745 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.09□□□□□ -1.27
CDH1-207ENST00000564745 GRIA2P42262 883 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
CDH1-207ENST00000564745 SFRP5Q5T4F7 317 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 YOD1Q5VVQ6 348 aaPredicted RBP7.08□□□□□ -1.28
CDH1-207ENST00000564745 ZNF227Q86WZ6 799 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 DTWD2Q8NBA8 298 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 EPN3Q9H201 632 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 TMEM260Q9NX78 707 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 GFOD1Q9NXC2 390 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
CDH1-207ENST00000564745 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 CDC45O75419 566 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 HSD3B2P26439 372 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 DOC2BQ14184 412 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 TKFCQ3LXA3 575 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 FAM181AQ8N9Y4 354 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 WHRNQ9P202 907 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 LRP2BPQ9P2M1 347 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 PCDHB12Q9Y5F1 795 aa7.07□□□□□ -1.28
CDH1-207ENST00000564745 MEIS1O00470 390 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 CYP7A1P22680 504 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 L1CAMP32004 1257 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 PPP2R2AP63151 447 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 TNK2Q07912 1038 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 PPP2R5DQ14738 602 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 RNF43Q68DV7 783 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 LRRC47Q8N1G4 583 aaKnown RBP7.06□□□□□ -1.28
CDH1-207ENST00000564745 ZBTB38Q8NAP3 1195 aaPredicted RBP7.06□□□□□ -1.28
CDH1-207ENST00000564745 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 GBP3Q9H0R5 595 aa7.06□□□□□ -1.28
CDH1-207ENST00000564745 NOL6Q9H6R4 1146 aaKnown RBP7.06□□□□□ -1.28
CDH1-207ENST00000564745 ANKRD62A6NC57 917 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 PPP1R12AO14974 1030 aaPredicted RBP7.05□□□□□ -1.28
CDH1-207ENST00000564745 PPM1BO75688 479 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 CAPNS1P04632 268 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 NAT2P11245 290 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 ITGA4P13612 1032 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 C21orf62-AS1Q17RA5 79 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 PLEKHG4Q58EX7 1191 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 FAM209AQ5JX71 171 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 NOL9Q5SY16 702 aaKnown RBP7.05□□□□□ -1.28
CDH1-207ENST00000564745 HOMER1Q86YM7 354 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 FIBCD1Q8N539 461 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 BVESQ8NE79 360 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 APPBP2Q92624 585 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 SGSM3Q96HU1 749 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 EXOC2Q96KP1 924 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 MRGPRX3Q96LB0 322 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 CGGBP1Q9UFW8 167 aaPredicted RBP7.05□□□□□ -1.28
CDH1-207ENST00000564745 AKT3Q9Y243 479 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 EMC9Q9Y3B6 208 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 CAPN6Q9Y6Q1 641 aa7.05□□□□□ -1.28
CDH1-207ENST00000564745 IQCA1LA6NCM1 817 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 WASH4PA8MWX3 477 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 WDR64B1ANS9 1081 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 AGRPO00253 132 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 PRAMEF1O95521 474 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 ASMTLO95671 621 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 ZNF865P0CJ78 1059 aaPredicted RBP7.04□□□□□ -1.28
CDH1-207ENST00000564745 CANXP27824 592 aaKnown RBP7.04□□□□□ -1.28
CDH1-207ENST00000564745 NFIAQ12857 509 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 SF1Q15637 639 aaKnown RBP7.04□□□□□ -1.28
CDH1-207ENST00000564745 CYP27C1Q4G0S4 372 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 ARHGEF39Q8N4T4 335 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 SHKBP1Q8TBC3 707 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 ZDHHC15Q96MV8 337 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 CWC22Q9HCG8 908 aaKnown RBP7.04□□□□□ -1.28
CDH1-207ENST00000564745 GTF2IRD1Q9UHL9 959 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 FHOD1Q9Y613 1164 aa7.04□□□□□ -1.28
CDH1-207ENST00000564745 H0Y8X5 98 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 IGF2BP3O00425 579 aaKnown RBP eCLIP7.03□□□□□ -1.28
CDH1-207ENST00000564745 SIGLEC6O43699 453 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 VAMP4O75379 141 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 KCNH1O95259 989 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 ITIH2P19823 946 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 OXCT1P55809 520 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 NMIQ13287 307 aaPredicted RBP7.03□□□□□ -1.28
CDH1-207ENST00000564745 CBX2Q14781 532 aaPredicted RBP7.03□□□□□ -1.28
CDH1-207ENST00000564745 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 MFSD4AQ8N468 514 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 ZSWIM2Q8NEG5 633 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
CDH1-207ENST00000564745 BTN2A2Q8WVV5 523 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 RCC1LQ96I51 464 aaKnown RBP7.03□□□□□ -1.28
CDH1-207ENST00000564745 DBNDD2Q9BQY9 259 aa7.03□□□□□ -1.28
CDH1-207ENST00000564745 AARSD1Q9BTE6 412 aaKnown RBP7.03□□□□□ -1.28
CDH1-207ENST00000564745 MSTNO14793 375 aa7.02□□□□□ -1.29
CDH1-207ENST00000564745 CTSKP43235 329 aa7.02□□□□□ -1.29
CDH1-207ENST00000564745 KIR3DL1P43629 444 aa7.02□□□□□ -1.29
CDH1-207ENST00000564745 HSP90AA2PQ14568 343 aaPredicted RBP7.02□□□□□ -1.29
CDH1-207ENST00000564745 NKPD1Q17RQ9 610 aa7.02□□□□□ -1.29
CDH1-207ENST00000564745 TMEM67Q5HYA8 995 aa7.02□□□□□ -1.29
CDH1-207ENST00000564745 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms