RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MAP3K11Q16584 847 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CCDC73Q6ZRK6 1079 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 IQCA1Q86XH1 822 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 AMOTL1Q8IY63 956 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 FBXO18Q8NFZ0 1043 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 MCM9Q9NXL9 1143 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 SIPA1L1O43166 1804 aa8.59□□□□□ -1.03
MAP1LC3B-205ENST00000564638 MYH8P13535 1937 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 TNKSO95271 1327 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PPFIA3O75145 1194 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CCDC192P0DO97 292 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CALM1P0DP23 149 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CALM2P0DP24 149 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CALM3P0DP25 149 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 IFNAR1P17181 557 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CDC27P30260 824 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 KIF23Q02241 960 aaPredicted RBP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 STK38Q15208 465 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CTR9Q6PD62 1173 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RASAL3Q86YV0 1011 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CCDC144CPQ8IYA2 1237 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ZNF654Q8IZM8 581 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 FAM43AQ8N2R8 423 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SLC10A4Q96EP9 437 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 USP28Q96RU2 1077 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PPP1R9BQ96SB3 815 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ZKSCAN3Q9BRR0 538 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 MYL10Q9BUA6 226 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SLC26A6Q9BXS9 759 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 TNMDQ9H2S6 317 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DHX36Q9H2U1 1008 aaKnown RBP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CLSTN2Q9H4D0 955 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DCP1AQ9NPI6 582 aaPredicted RBP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 INCENPQ9NQS7 918 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RTEL1Q9NZ71 1219 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RCOR1Q9UKL0 485 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CSADQ9Y600 493 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
MAP1LC3B-205ENST00000564638 COL2A1P02458 1487 aaPredicted RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ATAD5Q96QE3 1844 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CYP2D7A0A087X1C5 515 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 USP17L12C9JPN9 530 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 USP17L21D6R901 530 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RANBP6O60518 1105 aaKnown RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DDAH1O94760 285 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 YEATS4O95619 227 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SLC10A3P09131 477 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 FGRP09769 529 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CYP2D6P10635 497 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 LIG1P18858 919 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 INPP5BP32019 993 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ADD1P35611 737 aaKnown RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ME1P48163 572 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CEBPZQ03701 1054 aaKnown RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PDE4BQ07343 736 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SAFBQ15424 915 aaKnown RBP eCLIP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 SEC23AQ15436 765 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 NTRK3Q16288 839 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 LDLRAD1Q5T700 205 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 IFIT1BQ5T764 474 aaKnown RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 KRT40Q6A162 431 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CATIPQ7Z7H3 387 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RNF214Q8ND24 703 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 KCNG4Q8TDN1 519 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 NUP133Q8WUM0 1156 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PHKBQ93100 1093 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 HHIPL1Q96JK4 782 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PGBD1Q96JS3 809 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 RBM28Q9NW13 759 aaKnown RBP8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DACT1Q9NYF0 836 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 PI4KBQ9UBF8 816 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DOCK1Q14185 1865 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 ATRNL1Q5VV63 1379 aa8.57□□□□□ -1.04
MAP1LC3B-205ENST00000564638 CTAGE5O15320 804 aa8.56□□□□□ -1.04
MAP1LC3B-205ENST00000564638 DEXIO95424 95 aa8.56□□□□□ -1.04
MAP1LC3B-205ENST00000564638 MAP2K2P36507 400 aa8.56□□□□□ -1.04
MAP1LC3B-205ENST00000564638 AKAP17AQ02040 695 aaKnown RBP8.56□□□□□ -1.04
MAP1LC3B-205ENST00000564638 EVX2Q03828 476 aa8.56□□□□□ -1.04
MAP1LC3B-205ENST00000564638 VGLL4Q14135 290 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms