RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 TCP11L1Q9NUJ3 509 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 DDX60Q8IY21 1712 aaKnown RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 CCDC194A0A1B0GVG4 234 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 A0A1W2PQC6 194 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 LRRC10BA6NIK2 292 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 TSPY2A6NKD2 308 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 USP27XA6NNY8 438 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 A6NNZ2 444 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 G3V3G9 751 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 N4BP3O15049 544 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
ATXN3-249ENST00000564606 TADA3O75528 432 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SCG2P13521 617 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SMARCA1P28370 1054 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 GNA11P29992 359 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SEC23AQ15436 765 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 TERF2Q15554 542 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 TUBB8Q3ZCM7 444 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF658Q5TYW1 1059 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 FBXO38Q6PIJ6 1188 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 ARHGAP27Q6ZUM4 889 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 TMTC3Q6ZXV5 915 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 HDXQ7Z353 690 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SRGAP1Q7Z6B7 1085 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 SH3RF1Q7Z6J0 888 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 REXO1L1PQ8IX06 675 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 WDR66Q8TBY9 1149 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 DHX58Q96C10 678 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 CLIC6Q96NY7 704 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 NLRP3Q96P20 1036 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 ARID3AQ99856 593 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 CSRNP2Q9H175 543 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 THAP9Q9H5L6 903 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 EPB41L4AQ9HCS5 686 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-249ENST00000564606 FAM53CQ9NYF3 392 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 LIMA1Q9UHB6 759 aaKnown RBP8.61□□□□□ -1.03
ATXN3-249ENST00000564606 CDC23Q9UJX2 597 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 MRFAP1Q9Y605 127 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 PLCH1Q4KWH8 1693 aa8.61□□□□□ -1.03
ATXN3-249ENST00000564606 BCL9LQ86UU0 1499 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CTAGE15A4D2H0 777 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 SLC26A4O43511 780 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 KRT86O43790 486 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CTAGE8P0CG41 777 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 ATP1A3P13637 1013 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 OSBPP22059 807 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 UBA7P41226 1012 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CRKLP46109 303 aaKnown RBP8.6□□□□□ -1.03
ATXN3-249ENST00000564606 DNM2P50570 870 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CHMP4BP1P59074 171 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 PFKFB3Q16875 520 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-249ENST00000564606 ERCC6LQ2NKX8 1250 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 KIF4BQ2VIQ3 1234 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CDKAL1Q5VV42 579 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 RRAGBQ5VZM2 374 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 TRIM65Q6PJ69 517 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF662Q6ZS27 426 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 RASGRP2Q7LDG7 609 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 KRT25Q7Z3Z0 450 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CTAGE6Q86UF2 777 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CTAGE4Q8IX94 777 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 CCDC170Q8IYT3 715 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 LCORLQ8N3X6 602 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 TC2NQ8N9U0 490 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 TSC1Q92574 1164 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 PAGE5Q96GU1 130 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 DHTKD1Q96HY7 919 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-249ENST00000564606 NUP88Q99567 741 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-249ENST00000564606 NAPGQ99747 312 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-249ENST00000564606 GLT8D2Q9H1C3 349 aa8.6□□□□□ -1.03
ATXN3-249ENST00000564606 DOCK2Q92608 1830 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 NHSL1Q5SYE7 1610 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 AKAP11Q9UKA4 1901 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 USO1O60763 962 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 DTNBO60941 627 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 MFAP3LO75121 409 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 NTSR2O95665 410 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 IVLP07476 585 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 RXRAP19793 462 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 FECHP22830 423 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 HIBADHP31937 336 aaKnown RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 STAT6P42226 847 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 TOB1P50616 345 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-249ENST00000564606 BCAMP50895 628 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 SIK1P57059 783 aa8.59□□□□□ -1.03
ATXN3-249ENST00000564606 DPYDQ12882 1025 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 579.5 ms