RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PCDHB14Q9Y5E9 798 aa5.36□□□□□ -1.55
CHD9-211ENST00000564600 PCDHGB7Q9Y5F8 929 aa5.36□□□□□ -1.55
CHD9-211ENST00000564600 RBM47A0AV96 593 aaKnown RBP5.35□□□□□ -1.55
CHD9-211ENST00000564600 PSPNO60542 156 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 RECKO95980 971 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 PI3P19957 117 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 SDHBP21912 280 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 LTKP29376 864 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 CLCQ05315 142 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 SKOR2Q2VWA4 1001 aaPredicted RBP5.35□□□□□ -1.55
CHD9-211ENST00000564600 GAB4Q2WGN9 574 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 TMPRSS7Q7RTY8 843 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 ZDHHC14Q8IZN3 488 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 MARCH10Q8NA82 808 aaPredicted RBP5.35□□□□□ -1.55
CHD9-211ENST00000564600 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 EAF1Q96JC9 268 aaPredicted RBP5.35□□□□□ -1.55
CHD9-211ENST00000564600 KIF2CQ99661 725 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 ANTXR1Q9H6X2 564 aa5.35□□□□□ -1.55
CHD9-211ENST00000564600 SUPT16HQ9Y5B9 1047 aaKnown RBP5.35□□□□□ -1.55
CHD9-211ENST00000564600 OTOL1A6NHN0 477 aaPredicted RBP5.34□□□□□ -1.55
CHD9-211ENST00000564600 SLC22A31A6NKX4 558 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 CYP7A1P22680 504 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 POLR2BP30876 1174 aaKnown RBP5.34□□□□□ -1.55
CHD9-211ENST00000564600 KIR3DL1P43629 444 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 NFIXQ14938 502 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 SEZ6Q53EL9 994 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
CHD9-211ENST00000564600 SYT8Q8NBV8 401 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 VWCEQ96DN2 955 aa5.34□□□□□ -1.55
CHD9-211ENST00000564600 SHISA3A0PJX4 238 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 UNCXA6NJT0 531 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 UBOX5O94941 541 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 ATE1O95260 518 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 SRFP11831 508 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 ZNF76P36508 570 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 ETV3P41162 512 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
CHD9-211ENST00000564600 EPHB3P54753 998 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 RACK1P63244 317 aaKnown RBP5.33□□□□□ -1.56
CHD9-211ENST00000564600 CWF19L2Q2TBE0 894 aaKnown RBP5.33□□□□□ -1.56
CHD9-211ENST00000564600 ARSHQ5FYA8 562 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 TCERG1LQ5VWI1 586 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 GK5Q6ZS86 529 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 DTWD2Q8NBA8 298 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 PDZD8Q8NEN9 1154 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 KREMEN1Q96MU8 473 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 SLC6A17Q9H1V8 727 aa5.33□□□□□ -1.56
CHD9-211ENST00000564600 YBX2Q9Y2T7 364 aaKnown RBP5.33□□□□□ -1.56
CHD9-211ENST00000564600 ROBO2Q9HCK4 1378 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 SYN1P17600 705 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 APOBRQ0VD83 1088 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 OVOS1Q6IE37 1185 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 PRRT2Q7Z6L0 340 aaPredicted RBP5.32□□□□□ -1.56
CHD9-211ENST00000564600 PHACTR4Q8IZ21 702 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 PIWIL2Q8TC59 973 aaKnown RBP5.32□□□□□ -1.56
CHD9-211ENST00000564600 SHISA4Q96DD7 197 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 CCDC74BQ96LY2 380 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 XYLT2Q9H1B5 865 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 ZNF552Q9H707 407 aaPredicted RBP5.32□□□□□ -1.56
CHD9-211ENST00000564600 EHMT1Q9H9B1 1298 aa5.32□□□□□ -1.56
CHD9-211ENST00000564600 KIAA1522Q9P206 1035 aaPredicted RBP5.32□□□□□ -1.56
CHD9-211ENST00000564600 ADAMTS20P59510 1910 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 TEX51A0A1B0GUA7 166 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 ITGAEP38570 1179 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 TNNI2P48788 182 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 NFKB2Q00653 900 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 ADGRF1Q5T601 910 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 USP48Q86UV5 1035 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
CHD9-211ENST00000564600 IRF2BP1Q8IU81 584 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 SLITRK4Q8IW52 837 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 RNF141Q8WVD5 230 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 COX4I2Q96KJ9 171 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 SPON2Q9BUD6 331 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 NT5C1AQ9BXI3 368 aa5.31□□□□□ -1.56
CHD9-211ENST00000564600 NOTOA8MTQ0 251 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 RGS13O14921 159 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 USP2O75604 605 aaPredicted RBP5.3□□□□□ -1.56
CHD9-211ENST00000564600 MCM4P33991 863 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 SNW1Q13573 536 aaKnown RBP5.3□□□□□ -1.56
CHD9-211ENST00000564600 ZNF385BQ569K4 471 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 METTL16Q86W50 562 aaKnown RBP5.3□□□□□ -1.56
CHD9-211ENST00000564600 KIAA0825Q8IV33 1275 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 OXR1Q8N573 874 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 RGS22Q8NE09 1264 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 ATG4CQ96DT6 458 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 GPR62Q9BZJ7 368 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 TRIT1Q9H3H1 467 aaKnown RBP5.3□□□□□ -1.56
CHD9-211ENST00000564600 EPB41L4AQ9HCS5 686 aaPredicted RBP5.3□□□□□ -1.56
CHD9-211ENST00000564600 GPATCH2Q9NW75 528 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 GMIPQ9P107 970 aa5.3□□□□□ -1.56
CHD9-211ENST00000564600 FITM1A5D6W6 292 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 SEMA7AO75326 666 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 RAG1P15918 1043 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 SRSF3P84103 164 aaKnown RBP5.29□□□□□ -1.56
CHD9-211ENST00000564600 KIR3DS1Q14943 382 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 CDCP2Q5VXM1 449 aa5.29□□□□□ -1.56
CHD9-211ENST00000564600 C9orf131Q5VYM1 1079 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms