RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
KNOP1-202ENST00000564480 SWAP70Q9UH65 585 aa16.64■□□□□ 0.25
KNOP1-202ENST00000564480 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 USP17L21D6R901 530 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 PGK1P00558 417 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 FCER1AP12319 257 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 EEF2P13639 858 aaKnown RBP16.63■□□□□ 0.25
KNOP1-202ENST00000564480 ADD2P35612 726 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 HNRNPUQ00839 825 aaKnown RBP eCLIP16.63■□□□□ 0.25
KNOP1-202ENST00000564480 C12orf60Q5U649 245 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 C1orf53Q5VUE5 145 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 LENG1Q96BZ8 264 aaPredicted RBP16.63■□□□□ 0.25
KNOP1-202ENST00000564480 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 PHF24Q9UPV7 400 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 EYSQ5T1H1 3165 aa16.63■□□□□ 0.25
KNOP1-202ENST00000564480 ZNF792Q3KQV3 632 aa16.62■□□□□ 0.25
KNOP1-202ENST00000564480 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
KNOP1-202ENST00000564480 REPS2Q8NFH8 660 aa16.62■□□□□ 0.25
KNOP1-202ENST00000564480 MYLIPQ8WY64 445 aa16.62■□□□□ 0.25
KNOP1-202ENST00000564480 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
KNOP1-202ENST00000564480 PARP14Q460N5 1801 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
KNOP1-202ENST00000564480 ZNF865P0CJ78 1059 aaPredicted RBP16.61■□□□□ 0.25
KNOP1-202ENST00000564480 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 RIOX2Q8IUF8 465 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 CCDC17Q96LX7 622 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 XPNPEP3Q9NQH7 507 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 PAG1Q9NWQ8 432 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 ZNF214Q9UL59 606 aaPredicted RBP16.61■□□□□ 0.25
KNOP1-202ENST00000564480 SMCHD1A6NHR9 2005 aa16.61■□□□□ 0.25
KNOP1-202ENST00000564480 VWA5AO00534 786 aa16.6■□□□□ 0.25
KNOP1-202ENST00000564480 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
KNOP1-202ENST00000564480 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
KNOP1-202ENST00000564480 SMAD3P84022 425 aaKnown RBP16.6■□□□□ 0.25
KNOP1-202ENST00000564480 C16orf86Q6ZW13 317 aa16.6■□□□□ 0.25
KNOP1-202ENST00000564480 MMP19Q99542 508 aa16.6■□□□□ 0.25
KNOP1-202ENST00000564480 TINF2Q9BSI4 451 aa16.6■□□□□ 0.25
KNOP1-202ENST00000564480 BAZ2AQ9UIF9 1905 aaKnown RBP16.59■□□□□ 0.25
KNOP1-202ENST00000564480 SLC25A27O95847 323 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 RARBP10826 455 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 ATP5JP18859 108 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 STAT3P40763 770 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 MAFAQ8NHW3 353 aaPredicted RBP16.59■□□□□ 0.25
KNOP1-202ENST00000564480 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
KNOP1-202ENST00000564480 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
KNOP1-202ENST00000564480 PPP1R9AQ9ULJ8 1098 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 TACC3Q9Y6A5 838 aa16.59■□□□□ 0.25
KNOP1-202ENST00000564480 COL11A1P12107 1806 aaPredicted RBP16.59■□□□□ 0.25
KNOP1-202ENST00000564480 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.25
KNOP1-202ENST00000564480 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
KNOP1-202ENST00000564480 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 KIAA0355O15063 1070 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 ADAMTS4O75173 837 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 CLTBP09497 229 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
KNOP1-202ENST00000564480 HAUS7Q99871 368 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 ZBTB40Q9NUA8 1239 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 DIS3Q9Y2L1 958 aaKnown RBP16.58■□□□□ 0.24
KNOP1-202ENST00000564480 RIPK3Q9Y572 518 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 VCANP13611 3396 aa16.58■□□□□ 0.24
KNOP1-202ENST00000564480 PQBP1O60828 265 aaKnown RBP16.57■□□□□ 0.24
KNOP1-202ENST00000564480 SNAI1O95863 264 aaPredicted RBP16.57■□□□□ 0.24
KNOP1-202ENST00000564480 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
KNOP1-202ENST00000564480 KCTD2Q14681 263 aa16.57■□□□□ 0.24
KNOP1-202ENST00000564480 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
KNOP1-202ENST00000564480 SLC4A4Q9Y6R1 1079 aa16.57■□□□□ 0.24
KNOP1-202ENST00000564480 PRUNE2Q8WUY3 3088 aa16.57■□□□□ 0.24
KNOP1-202ENST00000564480 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
KNOP1-202ENST00000564480 UBE3CQ15386 1083 aa16.56■□□□□ 0.24
KNOP1-202ENST00000564480 CCSAPQ6IQ19 270 aaPredicted RBP16.56■□□□□ 0.24
KNOP1-202ENST00000564480 RNF180Q86T96 592 aa16.56■□□□□ 0.24
KNOP1-202ENST00000564480 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
KNOP1-202ENST00000564480 CDH23Q9H251 3354 aa16.56■□□□□ 0.24
KNOP1-202ENST00000564480 ROBO3Q96MS0 1386 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 DNAJC25-GNG10A0A024R161 153 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 ADCY6O43306 1168 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 RAD21O60216 631 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 RAG1P15918 1043 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 ACLYP53396 1101 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 MIER1Q8N108 512 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 KLHDC9Q8NEP7 349 aa16.55■□□□□ 0.24
KNOP1-202ENST00000564480 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
KNOP1-202ENST00000564480 SPTBN5Q9NRC6 3674 aaKnown RBP16.55■□□□□ 0.24
KNOP1-202ENST00000564480 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 AKR1A1P14550 325 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 RASA1P20936 1047 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 GRIN2CQ14957 1233 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 C16orf59Q7L2K0 433 aa16.54■□□□□ 0.24
KNOP1-202ENST00000564480 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms