RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 A0A1W2PRG0 241 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 APBB1O00213 710 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 GNAI2P04899 355 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 PGK2P07205 417 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 AKR1A1P14550 325 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 TAL1P17542 331 aaPredicted RBP8.91□□□□□ -0.98
VPS4A-203ENST00000564399 PLCD1P51178 756 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 ACLYP53396 1101 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 KCTD2Q14681 263 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 ANKRD33Q7Z3H0 272 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 MAGEB6Q8N7X4 407 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 NUP133Q8WUM0 1156 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 LENG1Q96BZ8 264 aaPredicted RBP8.91□□□□□ -0.98
VPS4A-203ENST00000564399 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 MMP19Q99542 508 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 TINF2Q9BSI4 451 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 C1QTNF1Q9BXJ1 281 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
VPS4A-203ENST00000564399 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 CNPY2Q9Y2B0 182 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 GBF1Q92538 1859 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 MUC6Q6W4X9 2439 aa8.91□□□□□ -0.98
VPS4A-203ENST00000564399 MCM3APO60318 1980 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 SLC25A27O95847 323 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 ACRP10323 421 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 ADGRE1Q14246 886 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 RAB30Q15771 203 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 KCNA10Q16322 511 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 TMEM240Q5SV17 173 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 MFSD5Q6N075 450 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 ZNF365Q70YC5 407 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 SPICE1Q8N0Z3 855 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 MICALL1Q8N3F8 863 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 TMEM199Q8N511 208 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 NECAB3Q96P71 396 aaPredicted RBP8.9□□□□□ -0.98
VPS4A-203ENST00000564399 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
VPS4A-203ENST00000564399 SLC28A3Q9HAS3 691 aa8.9□□□□□ -0.98
VPS4A-203ENST00000564399 A0A0G2JMZ2 1700 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 MROH7Q68CQ1 1323 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 ADAMTS4O75173 837 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 SURF6O75683 361 aaKnown RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 CT47B1P0C2W7 299 aaPredicted RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 ZNF865P0CJ78 1059 aaPredicted RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 CSF2RAP15509 400 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 TMEM132BQ14DG7 1078 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 KIAA1755Q5JYT7 1200 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 PSRC1Q6PGN9 363 aaPredicted RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 C16orf59Q7L2K0 433 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 ZNF512BQ96KM6 892 aaPredicted RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 GLT1D1Q96MS3 346 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 PPP1R12CQ9BZL4 782 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 CCDC8Q9H0W5 538 aaPredicted RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 MTIF3Q9H2K0 278 aaKnown RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 NKX2-4Q9H2Z4 354 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 SH2D4AQ9H788 454 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 ARHGEF10LQ9HCE6 1279 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 MCM9Q9NXL9 1143 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 TBX21Q9UL17 535 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 FAM184BQ9ULE4 1060 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
VPS4A-203ENST00000564399 BRWD1Q9NSI6 2320 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 NAV1Q8NEY1 1877 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 PARP14Q460N5 1801 aa8.89□□□□□ -0.99
VPS4A-203ENST00000564399 SYNRGQ9UMZ2 1314 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 TLR3O15455 904 aaKnown RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 RAD21O60216 631 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 C6orf222P0C671 652 aaPredicted RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 STAT3P40763 770 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 GABPAQ06546 454 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 AAK1Q2M2I8 961 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 ZNF792Q3KQV3 632 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 RASIP1Q5U651 963 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 TMEM179Q6ZVK1 233 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 CLEC10AQ8IUN9 316 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 ARHGAP45Q92619 1136 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 CRNKL1Q9BZJ0 848 aaKnown RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 CXXC1Q9P0U4 656 aaPredicted RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 ZHX1Q9UKY1 873 aaPredicted RBP8.88□□□□□ -0.99
VPS4A-203ENST00000564399 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
VPS4A-203ENST00000564399 ROBO3Q96MS0 1386 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 MUC3AQ02505 3323 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 ELP1O95163 1332 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 MAGEB6P1A0A0J9YX57 407 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 A0A0U1RQG5 324 aaPredicted RBP8.87□□□□□ -0.99
VPS4A-203ENST00000564399 WDR46O15213 610 aaKnown RBP8.87□□□□□ -0.99
VPS4A-203ENST00000564399 IPO8O15397 1037 aaKnown RBP8.87□□□□□ -0.99
VPS4A-203ENST00000564399 FGBP02675 491 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 BMP1P13497 986 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 CYP2C18P33260 490 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 RARSP54136 660 aaKnown RBP8.87□□□□□ -0.99
VPS4A-203ENST00000564399 TFF2Q03403 129 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 EVX2Q03828 476 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 ICA1Q05084 483 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 RIOX2Q8IUF8 465 aa8.87□□□□□ -0.99
VPS4A-203ENST00000564399 PCSK9Q8NBP7 692 aaKnown RBP8.87□□□□□ -0.99
VPS4A-203ENST00000564399 KLHDC9Q8NEP7 349 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms