RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 HOXD10P28358 340 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 CCDC178Q5BJE1 867 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 CASC1Q6TDU7 716 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 DGKHQ86XP1 1220 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 TAF6LQ9Y6J9 622 aa20.41■□□□□ 0.86
USB1-209ENST00000564387 PLA2G6O60733 806 aa20.4■□□□□ 0.86
USB1-209ENST00000564387 FMNL1O95466 1100 aaPredicted RBP20.4■□□□□ 0.86
USB1-209ENST00000564387 TOP1P11387 765 aaKnown RBP20.4■□□□□ 0.86
USB1-209ENST00000564387 SLFN13Q68D06 897 aa20.4■□□□□ 0.86
USB1-209ENST00000564387 NUP88Q99567 741 aaPredicted RBP20.4■□□□□ 0.86
USB1-209ENST00000564387 TMEM47Q9BQJ4 181 aa20.4■□□□□ 0.86
USB1-209ENST00000564387 FBXO28Q9NVF7 368 aa20.4■□□□□ 0.86
USB1-209ENST00000564387 HPS5Q9UPZ3 1129 aa20.4■□□□□ 0.86
USB1-209ENST00000564387 E7EWF7 191 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 STOX1Q6ZVD7 989 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 IQCA1Q86XH1 822 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 ATG4CQ96DT6 458 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 GJD2Q9UKL4 321 aa20.39■□□□□ 0.85
USB1-209ENST00000564387 DOCK3Q8IZD9 2030 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 VWA5AO00534 786 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
USB1-209ENST00000564387 BMP3P12645 472 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 MAPK4P31152 587 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 CCNA1P78396 465 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 IRF5Q13568 498 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 PRPF38AQ8NAV1 312 aaKnown RBP20.38■□□□□ 0.85
USB1-209ENST00000564387 ZSCAN10Q96SZ4 725 aaPredicted RBP20.38■□□□□ 0.85
USB1-209ENST00000564387 SLF1Q9BQI6 1058 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 PAGR1Q9BTK6 254 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 PORCNQ9H237 461 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 FEM1BQ9UK73 627 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 PTCH2Q9Y6C5 1203 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 CENPFP49454 3210 aa20.38■□□□□ 0.85
USB1-209ENST00000564387 SNHG28P0DPA3 235 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 PRKCZQ05513 592 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 SHCBP1Q8NEM2 672 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 COA7Q96BR5 231 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 ARMC5Q96C12 935 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 GABRQQ9UN88 632 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 PLXNB2O15031 1838 aa20.37■□□□□ 0.85
USB1-209ENST00000564387 SLC27A2O14975 620 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 RAD21O60216 631 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 MCCP23508 829 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 SLC1A4P43007 532 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 TRDNQ13061 729 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 TMEM132BQ14DG7 1078 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 SEC23AQ15436 765 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 TSGA10IPQ3SY00 556 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 CREB3L3Q68CJ9 461 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
USB1-209ENST00000564387 DCAF4Q8WV16 495 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 USP6NLQ92738 828 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 ZKSCAN3Q9BRR0 538 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 MOV10L1Q9BXT6 1211 aaKnown RBP20.36■□□□□ 0.85
USB1-209ENST00000564387 SPATC1LQ9H0A9 340 aa20.36■□□□□ 0.85
USB1-209ENST00000564387 ZNF214Q9UL59 606 aaPredicted RBP20.36■□□□□ 0.85
USB1-209ENST00000564387 COL11A1P12107 1806 aaPredicted RBP20.35■□□□□ 0.85
USB1-209ENST00000564387 ATP2A1O14983 1001 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 FDX1P10109 184 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 FLT3LGP49771 235 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 BTNL9Q6UXG8 535 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 GPR142Q7Z601 462 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 MB21D2Q8IYB1 491 aaPredicted RBP20.35■□□□□ 0.85
USB1-209ENST00000564387 NCOA7Q8NI08 942 aa20.35■□□□□ 0.85
USB1-209ENST00000564387 TNKSO95271 1327 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
USB1-209ENST00000564387 ECM2O94769 699 aaPredicted RBP20.34■□□□□ 0.85
USB1-209ENST00000564387 PDHBP11177 359 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 MORN1Q5T089 497 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 PLEKHH3Q7Z736 793 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 FAM160B2Q86V87 743 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 PXYLP1Q8TE99 480 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 CHURC1Q8WUH1 139 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 KCNB2Q92953 911 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 SLC38A10Q9HBR0 1119 aa20.34■□□□□ 0.85
USB1-209ENST00000564387 TMEM232C9JQI7 657 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 STAT2P52630 851 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 IFFO2Q5TF58 517 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 RIOX2Q8IUF8 465 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 MROH8Q9H579 483 aa20.33■□□□□ 0.85
USB1-209ENST00000564387 STRNO43815 780 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 SLC25A27O95847 323 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 XRCC5P13010 732 aaKnown RBP20.32■□□□□ 0.84
USB1-209ENST00000564387 PTPREP23469 700 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 OAZ1P54368 228 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 ANTXR2P58335 489 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 KCTD1Q719H9 257 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 RALYLQ86SE5 291 aaKnown RBP20.32■□□□□ 0.84
USB1-209ENST00000564387 PNMA1Q8ND90 353 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 SOCS4Q8WXH5 440 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 UBAC1Q9BSL1 405 aa20.32■□□□□ 0.84
USB1-209ENST00000564387 STAT3P40763 770 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 ZNF543Q08ER8 600 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 GRB14Q14449 540 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms