RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
PKD1-227ENST00000564313 B4E1Z4 1266 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 FLOT1O75955 427 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 TOP1P11387 765 aaKnown RBP21.52■■□□□ 1.04
PKD1-227ENST00000564313 HOXD10P28358 340 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 PRMT2P55345 433 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 RNF20Q5VTR2 975 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 LRRC47Q8N1G4 583 aaKnown RBP21.52■■□□□ 1.04
PKD1-227ENST00000564313 GPRC5AQ8NFJ5 357 aa21.52■■□□□ 1.04
PKD1-227ENST00000564313 ZSWIM8A7E2V4 1837 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 SPDYE16A6NNV3 312 aaPredicted RBP21.51■■□□□ 1.03
PKD1-227ENST00000564313 NMT2O60551 498 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 ECM2O94769 699 aaPredicted RBP21.51■■□□□ 1.03
PKD1-227ENST00000564313 REC8O95072 547 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 CTGFP29279 349 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 PSMC4P43686 418 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 RALYLQ86SE5 291 aaKnown RBP21.51■■□□□ 1.03
PKD1-227ENST00000564313 DGKHQ86XP1 1220 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 NCOA7Q8NI08 942 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 MGAMO43451 1857 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 CEP290O15078 2479 aa21.51■■□□□ 1.03
PKD1-227ENST00000564313 PARP14Q460N5 1801 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 DSG3P32926 999 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 ERVK-9P63128 1117 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 ERVK-24P63145 666 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 CCNA1P78396 465 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 FAM83BQ5T0W9 1011 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 SLFN13Q68D06 897 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 CHRDL2Q6WN34 429 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 GMCL1Q96IK5 515 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 UBAC1Q9BSL1 405 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 ZSWIM5Q9P217 1185 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 RBPJLQ9UBG7 517 aa21.5■■□□□ 1.03
PKD1-227ENST00000564313 A0A0G2JMZ2 1700 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 RLFQ13129 1914 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 RANBP2P49792 3224 aaKnown RBP21.49■■□□□ 1.03
PKD1-227ENST00000564313 E7EWF7 191 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 EPB41L2O43491 1005 aaKnown RBP21.49■■□□□ 1.03
PKD1-227ENST00000564313 FMNL1O95466 1100 aaPredicted RBP21.49■■□□□ 1.03
PKD1-227ENST00000564313 BMP3P12645 472 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 NECTIN1Q15223 517 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 ZSCAN10Q96SZ4 725 aaPredicted RBP21.49■■□□□ 1.03
PKD1-227ENST00000564313 PAGR1Q9BTK6 254 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 FEM1BQ9UK73 627 aa21.49■■□□□ 1.03
PKD1-227ENST00000564313 SLC1A4P43007 532 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 SLC9C1Q4G0N8 1177 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 SLC17A8Q8NDX2 589 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 DCAF4Q8WV16 495 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 ANKS1AQ92625 1134 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 SLF1Q9BQI6 1058 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 TMEM47Q9BQJ4 181 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 TXNRD2Q9NNW7 524 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 PPP1R9AQ9ULJ8 1098 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 PTCH2Q9Y6C5 1203 aa21.48■■□□□ 1.03
PKD1-227ENST00000564313 TNPO2O14787 897 aaKnown RBP21.47■■□□□ 1.03
PKD1-227ENST00000564313 SLC27A2O14975 620 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 EIF5BO60841 1220 aaKnown RBP21.47■■□□□ 1.03
PKD1-227ENST00000564313 MAPK4P31152 587 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 SART3Q15020 963 aaKnown RBP21.47■■□□□ 1.03
PKD1-227ENST00000564313 CREB3L3Q68CJ9 461 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 RCSD1Q6JBY9 416 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 NBPF11Q86T75 865 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
PKD1-227ENST00000564313 PRPF38AQ8NAV1 312 aaKnown RBP21.47■■□□□ 1.03
PKD1-227ENST00000564313 COA7Q96BR5 231 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 ADAMTS5Q9UNA0 930 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 TNKSO95271 1327 aa21.47■■□□□ 1.03
PKD1-227ENST00000564313 ERICH2A1L162 156 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 PLA2G6O60733 806 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 MYCP01106 439 aaPredicted RBP21.46■■□□□ 1.03
PKD1-227ENST00000564313 FDX1P10109 184 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 FAM160B2Q86V87 743 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 CHURC1Q8WUH1 139 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 NUP88Q99567 741 aaPredicted RBP21.46■■□□□ 1.03
PKD1-227ENST00000564313 ZKSCAN3Q9BRR0 538 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 MTA3Q9BTC8 594 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 RBM27Q9P2N5 1060 aaKnown RBP21.46■■□□□ 1.03
PKD1-227ENST00000564313 SRRDQ9UH36 339 aa21.46■■□□□ 1.03
PKD1-227ENST00000564313 CNMDO75829 334 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 ZKSCAN1P17029 563 aaPredicted RBP21.45■■□□□ 1.02
PKD1-227ENST00000564313 MCCP23508 829 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 STAT2P52630 851 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 ENAHQ8N8S7 591 aaPredicted RBP21.45■■□□□ 1.02
PKD1-227ENST00000564313 ATG4CQ96DT6 458 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 KAT14Q9H8E8 782 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 COL6A3P12111 3177 aa21.45■■□□□ 1.02
PKD1-227ENST00000564313 KRT32Q14532 448 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 Q3C1V9 767 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 IFIT1BQ5T764 474 aaKnown RBP21.44■■□□□ 1.02
PKD1-227ENST00000564313 POTEEQ6S8J3 1075 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 STOX1Q6ZVD7 989 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 NKX2-3Q8TAU0 364 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 FBXO28Q9NVF7 368 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 BTBD7Q9P203 1132 aa21.44■■□□□ 1.02
PKD1-227ENST00000564313 ISY1Q9ULR0 285 aaKnown RBP21.44■■□□□ 1.02
PKD1-227ENST00000564313 TMEM232C9JQI7 657 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 VWA5AO00534 786 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 PEX10O60683 326 aa21.43■■□□□ 1.02
PKD1-227ENST00000564313 COPB2P35606 906 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms