RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 CCDC6Q16204 474 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 BEND3Q5T5X7 828 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 WRNIP1Q96S55 665 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 RPS6KB1P23443 525 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 TBC1D8BQ0IIM8 1120 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 NME8Q8N427 588 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 ZSCAN10Q96SZ4 725 aaPredicted RBP13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 BLZF1Q9H2G9 400 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTTNBP2NLQ9P2B4 639 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 KLRF2D3W0D1 207 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 KRT86O43790 486 aa13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 DDX25Q9UHL0 483 aaKnown RBP13.37□□□□□ -0.27
TUBGCP4-208ENST00000564079 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 PSMD2Q13200 908 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 CHMLP26374 656 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 CCDC89Q8N998 374 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 SYNDIG1Q9H7V2 258 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 ZHX2Q9Y6X8 837 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 CSRNP2Q9H175 543 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 ARAP3Q8WWN8 1544 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 ELMOD1Q8N336 334 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 ATP7AQ04656 1500 aa13.36□□□□□ -0.27
TUBGCP4-208ENST00000564079 TNNC1P63316 161 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 PALLDQ8WX93 1383 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 KBTBD3Q8NAB2 608 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 SNX25Q9H3E2 840 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 SLC12A2P55011 1212 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 SMC6Q96SB8 1091 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 BCRP11274 1271 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 MFSD14CQ5VZR4 134 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 ZNF577Q9BSK1 485 aa13.35□□□□□ -0.27
TUBGCP4-208ENST00000564079 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 HS1BP3Q53T59 392 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 MTERF4Q7Z6M4 381 aaKnown RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 WDR17Q8IZU2 1322 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 ANXA13P27216 316 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 DYNLL1P63167 89 aaKnown RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 KRT33BQ14525 404 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 POMGNT1Q8WZA1 660 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PRAG1Q86YV5 1406 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 DENND3A2RUS2 1198 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 STAM2O75886 525 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 KCNG1Q9UIX4 513 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PHKA1P46020 1223 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PTPREP23469 700 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 STAT2P52630 851 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 IL6STP40189 918 aaPredicted RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 MTRF1LQ9UGC7 380 aaKnown RBP13.34□□□□□ -0.27
TUBGCP4-208ENST00000564079 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.27
TUBGCP4-208ENST00000564079 CTAGE9A4FU28 777 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 SATB1Q01826 763 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 CLUL1Q15846 466 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 MTERF2Q49AM1 385 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 TMC4Q7Z404 712 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 SPATA24Q86W54 205 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 ZNF654Q8IZM8 581 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 PRPF38AQ8NAV1 312 aaKnown RBP13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 UBLCP1Q8WVY7 318 aaPredicted RBP13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 DNAI1Q9UI46 699 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 TAB3Q8N5C8 712 aaPredicted RBP13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 ELP1O95163 1332 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 SEMA3EO15041 775 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 ECE2O60344 883 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 ARMCX5Q6P1M9 558 aa13.33□□□□□ -0.28
TUBGCP4-208ENST00000564079 FASTKD5Q7L8L6 764 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms