RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SH2D4AQ9H788 454 aa20.21■□□□□ 0.83
HDGFL3-203ENST00000563404 A0A0C4DFX4 3053 aa20.21■□□□□ 0.83
HDGFL3-203ENST00000563404 SEPT4O43236 478 aa20.2■□□□□ 0.82
HDGFL3-203ENST00000563404 KANSL2Q9H9L4 492 aa20.2■□□□□ 0.82
HDGFL3-203ENST00000563404 MTMR10Q9NXD2 777 aa20.2■□□□□ 0.82
HDGFL3-203ENST00000563404 COL11A1P12107 1806 aaPredicted RBP20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 SLC39A5Q6ZMH5 540 aa20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 AMOTL1Q8IY63 956 aa20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 ARRDC4Q8NCT1 418 aa20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 REPS2Q8NFH8 660 aa20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 STRBPQ96SI9 672 aaKnown RBP20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
HDGFL3-203ENST00000563404 PGK2P07205 417 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 FCER1AP12319 257 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 FAM47AQ5JRC9 791 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 ZSCAN25Q6NSZ9 544 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 SLC5A4Q9NY91 659 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 PPP1R9AQ9ULJ8 1098 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 ATP11BQ9Y2G3 1177 aa20.18■□□□□ 0.82
HDGFL3-203ENST00000563404 GREB1LQ9C091 1923 aaPredicted RBP20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 GSG1L2A8MUP6 293 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 VWA5AO00534 786 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 SLC25A27O95847 323 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 SNX17Q15036 470 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 LRRC41Q15345 812 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 FAM83BQ5T0W9 1011 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 RIOX2Q8IUF8 465 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 OSBP2Q969R2 916 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 MMP19Q99542 508 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 ECHDC1Q9NTX5 307 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 ZNF214Q9UL59 606 aaPredicted RBP20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 LTBP2Q14767 1821 aa20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 ZNFX1Q9P2E3 1918 aaKnown RBP20.17■□□□□ 0.82
HDGFL3-203ENST00000563404 KBTBD13C9JR72 458 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 RASA1P20936 1047 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 ADCYAP1R1P41586 468 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 SBK1Q52WX2 424 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 LBHD1Q9BQE6 289 aaPredicted RBP20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 GOPCQ9HD26 462 aa20.16■□□□□ 0.82
HDGFL3-203ENST00000563404 MYCNP04198 464 aaPredicted RBP20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 TAL1P17542 331 aaPredicted RBP20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 STAT3P40763 770 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 ZNF792Q3KQV3 632 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 TRIM60Q495X7 471 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 KBTBD3Q8NAB2 608 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 FERMT2Q96AC1 680 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 EPB41L4AQ9HCS5 686 aaPredicted RBP20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 STXBP5LQ9Y2K9 1186 aa20.15■□□□□ 0.82
HDGFL3-203ENST00000563404 POTEB2H3BUK9 544 aa20.14■□□□□ 0.81
HDGFL3-203ENST00000563404 DLL1O00548 723 aa20.14■□□□□ 0.81
HDGFL3-203ENST00000563404 RAD21O60216 631 aa20.14■□□□□ 0.81
HDGFL3-203ENST00000563404 TINF2Q9BSI4 451 aa20.14■□□□□ 0.81
HDGFL3-203ENST00000563404 ROBO3Q96MS0 1386 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 GIMAP6Q6P9H5 292 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 DCTPP1Q9H773 170 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 PDLIM7Q9NR12 457 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 PRKAG2Q9UGJ0 569 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 NRBP1Q9UHY1 535 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 SMCHD1A6NHR9 2005 aa20.13■□□□□ 0.81
HDGFL3-203ENST00000563404 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 MINDY4BA8MYZ0 360 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 NDUFB10O96000 172 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 ZNF865P0CJ78 1059 aaPredicted RBP20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 KCTD2Q14681 263 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 C1orf53Q5VUE5 145 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 APPBP2Q92624 585 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 TRIM43Q96BQ3 446 aaPredicted RBP20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 LENG1Q96BZ8 264 aaPredicted RBP20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 PRDM5Q9NQX1 630 aaPredicted RBP20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 NYAP2Q9P242 653 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 PHF24Q9UPV7 400 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 DIS3Q9Y2L1 958 aaKnown RBP20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 RIPK3Q9Y572 518 aa20.12■□□□□ 0.81
HDGFL3-203ENST00000563404 PLXNA1Q9UIW2 1896 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 F5H6K3 240 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 M0R2C6 588 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 PGK1P00558 417 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 KLRC3Q07444 240 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 SHHQ15465 462 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 C9orf50Q5SZB4 431 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 BADQ92934 168 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 GUCD1Q96NT3 240 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 SLF1Q9BQI6 1058 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 MKNK2Q9HBH9 465 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 XPNPEP3Q9NQH7 507 aa20.11■□□□□ 0.81
HDGFL3-203ENST00000563404 UNC80Q8N2C7 3258 aa20.1■□□□□ 0.81
HDGFL3-203ENST00000563404 GPAA1O43292 621 aa20.1■□□□□ 0.81
HDGFL3-203ENST00000563404 RARBP10826 455 aa20.1■□□□□ 0.81
HDGFL3-203ENST00000563404 FAM109BQ6ICB4 259 aaPredicted RBP20.1■□□□□ 0.81
HDGFL3-203ENST00000563404 CLIP2Q9UDT6 1046 aa20.1■□□□□ 0.81
HDGFL3-203ENST00000563404 PRDM1O75626 825 aa20.09■□□□□ 0.81
HDGFL3-203ENST00000563404 ITGB8P26012 769 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms