RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 PRDM1O75626 825 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 CTDNEP1O95476 244 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 CYP2D6P10635 497 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 IFNAR1P17181 557 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 FUT2Q10981 343 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 PICALMQ13492 652 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 MCM6Q14566 821 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 QPCTQ16769 361 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 ATL3Q6DD88 541 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 STK11IPQ8N1F8 1099 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 CTCFLQ8NI51 663 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 INCENPQ9NQS7 918 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 ORC3Q9UBD5 711 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
UBFD1-202ENST00000563366 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.61
UBFD1-202ENST00000563366 PSMD14O00487 310 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 MYO1BO43795 1136 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 LILRB3O75022 631 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 MBD3O95983 291 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 XBP1P17861 261 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 CDK8P49336 464 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 PLCD1P51178 756 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 KRT85P78386 507 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 TFAP4Q01664 338 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 SSRP1Q08945 709 aaKnown RBP11.26□□□□□ -0.61
UBFD1-202ENST00000563366 TRIM29Q14134 588 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 CFAP100Q494V2 611 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 PRPF38BQ5VTL8 546 aaKnown RBP11.26□□□□□ -0.61
UBFD1-202ENST00000563366 CIAPIN1Q6FI81 312 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 C8orf76Q96K31 380 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 MXD3Q9BW11 206 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 COL4A5P29400 1685 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 ATRNL1Q5VV63 1379 aa11.26□□□□□ -0.61
UBFD1-202ENST00000563366 SIPA1L1O43166 1804 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 NFKBIEO00221 500 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 FMNL1O95466 1100 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-202ENST00000563366 RASA1P20936 1047 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 GNAQP50148 359 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
UBFD1-202ENST00000563366 GUCA2AQ02747 115 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 DLGAP5Q15398 846 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 FKBP1CQ5VVH2 108 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 TMEM87AQ8NBN3 555 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 NEDD1Q8NHV4 660 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 HLA-CQ95604 372 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 GMLQ99445 158 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-202ENST00000563366 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-202ENST00000563366 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 MYH4Q9Y623 1939 aa11.25□□□□□ -0.61
UBFD1-202ENST00000563366 SOWAHBA6NEL2 793 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 TRAK2O60296 914 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 RAD17O75943 681 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 DEXIO95424 95 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 CDC27P30260 824 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 EIF6P56537 245 aaKnown RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 GABPAQ06546 454 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 TROAPQ12815 778 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 NTRK3Q16288 839 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 KLHL40Q2TBA0 621 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 FAM47AQ5JRC9 791 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 BRAPQ7Z569 592 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 BANK1Q8NDB2 785 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 WNT2BQ93097 391 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 DYNLL2Q96FJ2 89 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 DDX4Q9NQI0 724 aaKnown RBP11.24□□□□□ -0.61
UBFD1-202ENST00000563366 CFAP45Q9UL16 551 aa11.24□□□□□ -0.61
UBFD1-202ENST00000563366 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 FDPSP14324 419 aaKnown RBP11.23□□□□□ -0.61
UBFD1-202ENST00000563366 CXCL9Q07325 125 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 FAM177A1Q8N128 213 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-202ENST00000563366 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
UBFD1-202ENST00000563366 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
UBFD1-202ENST00000563366 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms