RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 RNF113AO15541 343 aaKnown RBP18.87■□□□□ 0.61
CLK3-211ENST00000563297 APPBP2Q92624 585 aa18.87■□□□□ 0.61
CLK3-211ENST00000563297 GPATCH3Q96I76 525 aa18.87■□□□□ 0.61
CLK3-211ENST00000563297 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
CLK3-211ENST00000563297 SLC5A4Q9NY91 659 aa18.87■□□□□ 0.61
CLK3-211ENST00000563297 COL11A1P12107 1806 aaPredicted RBP18.86■□□□□ 0.61
CLK3-211ENST00000563297 ZNF236Q9UL36 1845 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 MINDY4BA8MYZ0 360 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 SLC25A27O95847 323 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 FCER1AP12319 257 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 RASA1P20936 1047 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
CLK3-211ENST00000563297 VWA5AO00534 786 aa18.85■□□□□ 0.61
CLK3-211ENST00000563297 ZFYP08048 801 aaPredicted RBP18.85■□□□□ 0.61
CLK3-211ENST00000563297 FAM83BQ5T0W9 1011 aa18.85■□□□□ 0.61
CLK3-211ENST00000563297 MAML3Q96JK9 1138 aa18.85■□□□□ 0.61
CLK3-211ENST00000563297 PPP1R9AQ9ULJ8 1098 aa18.85■□□□□ 0.61
CLK3-211ENST00000563297 DNM1LO00429 736 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 SEPT4O43236 478 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 GPAA1O43292 621 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 RAD21O60216 631 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 STAT3P40763 770 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 GJC2Q5T442 439 aaPredicted RBP18.84■□□□□ 0.61
CLK3-211ENST00000563297 ANO1Q5XXA6 986 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 RIOX2Q8IUF8 465 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 REPS2Q8NFH8 660 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
CLK3-211ENST00000563297 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
CLK3-211ENST00000563297 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
CLK3-211ENST00000563297 ZNF214Q9UL59 606 aaPredicted RBP18.84■□□□□ 0.61
CLK3-211ENST00000563297 GREB1LQ9C091 1923 aaPredicted RBP18.84■□□□□ 0.61
CLK3-211ENST00000563297 PATL2C9JE40 543 aaKnown RBP18.83■□□□□ 0.6
CLK3-211ENST00000563297 F5H6K3 240 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 M0R2C6 588 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 GNAT2P19087 354 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 ATN1P54259 1190 aaPredicted RBP18.83■□□□□ 0.6
CLK3-211ENST00000563297 KLRC3Q07444 240 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 TDHQ8IZJ6 230 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 ARRDC4Q8NCT1 418 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 MMP19Q99542 508 aa18.83■□□□□ 0.6
CLK3-211ENST00000563297 LRIT3Q3SXY7 679 aa18.82■□□□□ 0.6
CLK3-211ENST00000563297 IFNL3Q8IZI9 196 aa18.82■□□□□ 0.6
CLK3-211ENST00000563297 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
CLK3-211ENST00000563297 NUP88Q99567 741 aaPredicted RBP18.82■□□□□ 0.6
CLK3-211ENST00000563297 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 APPP05067 770 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 PGK2P07205 417 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 TDO2P48775 406 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 MDM2Q00987 491 aaPredicted RBP18.81■□□□□ 0.6
CLK3-211ENST00000563297 ZNF792Q3KQV3 632 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 ZNF444Q8N0Y2 327 aaPredicted RBP18.81■□□□□ 0.6
CLK3-211ENST00000563297 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
CLK3-211ENST00000563297 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
CLK3-211ENST00000563297 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
CLK3-211ENST00000563297 DIS3Q9Y2L1 958 aaKnown RBP18.81■□□□□ 0.6
CLK3-211ENST00000563297 ERC2O15083 957 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 PRDM1O75626 825 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 NDUFB10O96000 172 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 KCTD2Q14681 263 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 LRRFIP1Q32MZ4 808 aaKnown RBP18.8■□□□□ 0.6
CLK3-211ENST00000563297 GPR153Q6NV75 609 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 SLC39A5Q6ZMH5 540 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 MKL1Q969V6 931 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 SLF1Q9BQI6 1058 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 TINF2Q9BSI4 451 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 PLXNA1Q9UIW2 1896 aa18.8■□□□□ 0.6
CLK3-211ENST00000563297 MYH4Q9Y623 1939 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 KBTBD13C9JR72 458 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 COPB2P35606 906 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 RTP1P59025 263 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 PRPF38AQ8NAV1 312 aaKnown RBP18.79■□□□□ 0.6
CLK3-211ENST00000563297 ZNF287Q9HBT7 754 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 NRBP1Q9UHY1 535 aa18.79■□□□□ 0.6
CLK3-211ENST00000563297 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
CLK3-211ENST00000563297 LRRC41Q15345 812 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 ZMYM1Q5SVZ6 1142 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 CEP95Q96GE4 821 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 MTMR4Q9NYA4 1195 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 RIPK3Q9Y572 518 aa18.78■□□□□ 0.6
CLK3-211ENST00000563297 TAL1P17542 331 aaPredicted RBP18.77■□□□□ 0.6
CLK3-211ENST00000563297 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
CLK3-211ENST00000563297 LBHD1Q9BQE6 289 aaPredicted RBP18.77■□□□□ 0.6
CLK3-211ENST00000563297 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.6
CLK3-211ENST00000563297 NACAP1Q9BZK3 213 aa18.77■□□□□ 0.6
CLK3-211ENST00000563297 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
CLK3-211ENST00000563297 ATP2A1O14983 1001 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 TTLL1O95922 423 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 ZNF865P0CJ78 1059 aaPredicted RBP18.76■□□□□ 0.59
CLK3-211ENST00000563297 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
CLK3-211ENST00000563297 NEDD1Q8NHV4 660 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 COL6A3P12111 3177 aa18.76■□□□□ 0.59
CLK3-211ENST00000563297 ZBED4O75132 1171 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms