RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ASPRV1Q53RT3 343 aa20.8■□□□□ 0.92
COMMD4-208ENST00000563220 ANO1Q5XXA6 986 aa20.8■□□□□ 0.92
COMMD4-208ENST00000563220 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.92
COMMD4-208ENST00000563220 SRCAPQ6ZRS2 3230 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 TNNI2P48788 182 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 ZNF543Q08ER8 600 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 RIOX1Q9H6W3 641 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 VAT1LQ9HCJ6 419 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 CABP5Q9NP86 173 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 GPCPD1Q9NPB8 672 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 GOLGA6L4A6NEF3 574 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 KRT2P35908 639 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 TOB1P50616 345 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-208ENST00000563220 MAP3K10Q02779 954 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 TYW1BQ6NUM6 668 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 GPC2Q8N158 579 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 TEPSINQ96N21 525 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 HACL1Q9UJ83 578 aa20.79■□□□□ 0.92
COMMD4-208ENST00000563220 H7C1D1 291 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 ADAMTS3O15072 1205 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 YEATS4O95619 227 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 LIG1P18858 919 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 NLRP5P59047 1200 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 STK38Q15208 465 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 SF3A1Q15459 793 aaKnown RBP20.78■□□□□ 0.92
COMMD4-208ENST00000563220 EARS2Q5JPH6 523 aaKnown RBP20.78■□□□□ 0.92
COMMD4-208ENST00000563220 WWC2Q6AWC2 1192 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 GPRC5DQ9NZD1 345 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 MYH15Q9Y2K3 1946 aa20.78■□□□□ 0.92
COMMD4-208ENST00000563220 GAS2L3Q86XJ1 694 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 TNFRSF25Q93038 417 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 PIGSQ96S52 555 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 SH3GLB2Q9NR46 395 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 MYH6P13533 1939 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 TNFAIP1Q13829 316 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 KCTD1Q719H9 257 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 HOMER1Q86YM7 354 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 TRPM4Q8TD43 1214 aa20.77■□□□□ 0.92
COMMD4-208ENST00000563220 A0A1W2PRG0 241 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 FAM205CA6NFA0 338 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 STXBP3O00186 592 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 SPTLC2O15270 562 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 ME1P48163 572 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 ZNF445P59923 1031 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 SLC39A14Q15043 492 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 PTPAQ15257 358 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 NOM1Q5C9Z4 860 aaKnown RBP20.76■□□□□ 0.91
COMMD4-208ENST00000563220 SLFN13Q68D06 897 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 RRP36Q96EU6 259 aaKnown RBP20.76■□□□□ 0.91
COMMD4-208ENST00000563220 BARHL2Q9NY43 387 aa20.76■□□□□ 0.91
COMMD4-208ENST00000563220 EPS15P42566 896 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 CCDC96Q2M329 555 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 GPATCH4Q5T3I0 446 aaKnown RBP20.75■□□□□ 0.91
COMMD4-208ENST00000563220 L1TD1Q5T7N2 865 aaKnown RBP20.75■□□□□ 0.91
COMMD4-208ENST00000563220 HEATR3Q7Z4Q2 680 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 KCNG4Q8TDN1 519 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-208ENST00000563220 BRMS1Q9HCU9 246 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 RNF181Q9P0P0 153 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 F5H6K3 240 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 RAD21O60216 631 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 KLRC3Q07444 240 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 RILPL1Q5EBL4 403 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 BICD2Q8TD16 824 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 DEFB129Q9H1M3 183 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
COMMD4-208ENST00000563220 SYCE3A1L190 88 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 FSD2A1L4K1 749 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 DDNO94850 711 aaPredicted RBP20.74■□□□□ 0.91
COMMD4-208ENST00000563220 SLC16A2P36021 539 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 CAP2P40123 477 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 SLC1A4P43007 532 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 CCDC183Q5T5S1 534 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 ADGRF4Q8IZF3 695 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 DCAF4Q8WV16 495 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 JMJD4Q9H9V9 463 aa20.74■□□□□ 0.91
COMMD4-208ENST00000563220 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.74■□□□□ 0.91
COMMD4-208ENST00000563220 PHF20L1A8MW92 1017 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 CALML3P27482 149 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 MARCKSP29966 332 aaPredicted RBP20.73■□□□□ 0.91
COMMD4-208ENST00000563220 HIRAP54198 1017 aaPredicted RBP20.73■□□□□ 0.91
COMMD4-208ENST00000563220 ADALQ6DHV7 355 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 CCAR1Q8IX12 1150 aaKnown RBP20.73■□□□□ 0.91
COMMD4-208ENST00000563220 GMCL1P1Q8NEA9 526 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 ACER1Q8TDN7 264 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 SEC63Q9UGP8 760 aaKnown RBP20.73■□□□□ 0.91
COMMD4-208ENST00000563220 PCDHB6Q9Y5E3 794 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 NDUFB10O96000 172 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 ECE1P42892 770 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 ANGEL2Q5VTE6 544 aaKnown RBP20.73■□□□□ 0.91
COMMD4-208ENST00000563220 BLIDQ8IZY5 108 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 GOLPH3LQ9H4A5 285 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 DACT1Q9NYF0 836 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 PCDHA4Q9UN74 947 aa20.73■□□□□ 0.91
COMMD4-208ENST00000563220 SBF1O95248 1867 aa20.72■□□□□ 0.91
COMMD4-208ENST00000563220 M0R2N6 131 aa20.72■□□□□ 0.91
COMMD4-208ENST00000563220 NR1I2O75469 434 aa20.72■□□□□ 0.91
COMMD4-208ENST00000563220 ATP2B1P20020 1258 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms