RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
KLHDC4-209ENST00000562872 LAMA3Q16787 3333 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 NDUFB10O96000 172 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 COL6A1P12109 1028 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 TDO2P48775 406 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 SHCBP1Q8NEM2 672 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 REPS2Q8NFH8 660 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 NBPF3Q9H094 633 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
KLHDC4-209ENST00000562872 ERC2O15083 957 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 APPP05067 770 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 CYBAP13498 195 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 SYN1P17600 705 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 VPS53Q5VIR6 699 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 MFSD14CQ5VZR4 134 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 MB21D1Q8N884 522 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 STAP2Q9UGK3 403 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 NR2E3Q9Y5X4 410 aa13.21□□□□□ -0.29
KLHDC4-209ENST00000562872 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 VWA5AO00534 786 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 CNGA1P29973 690 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 LRRC26Q2I0M4 334 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 PRAMEF19Q5SWL8 479 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 RASGRP2Q7LDG7 609 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 GOPCQ9HD26 462 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 ZNF214Q9UL59 606 aaPredicted RBP13.2□□□□□ -0.3
KLHDC4-209ENST00000562872 F5H6K3 240 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 PGK2P07205 417 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 CAPN2P17655 700 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 GNAT2P19087 354 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 PDE1AP54750 535 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 KLRC3Q07444 240 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 MROH8Q9H579 483 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 MTMR4Q9NYA4 1195 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 CLIP2Q9UDT6 1046 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 DDX20Q9UHI6 824 aaKnown RBP13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 RIPK3Q9Y572 518 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
KLHDC4-209ENST00000562872 A0A0D9SFI3 127 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 SOX1O00570 391 aaPredicted RBP13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 STRNO43815 780 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 CTDSPL2Q05D32 466 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 PPARAQ07869 468 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 OLFML2BQ68BL8 750 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 MAML3Q96JK9 1138 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 SLF1Q9BQI6 1058 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 NAPBQ9H115 298 aa13.18□□□□□ -0.3
KLHDC4-209ENST00000562872 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 NMT2O60551 498 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 STAT3P40763 770 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 EXOC6Q8TAG9 804 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 MMP19Q99542 508 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 GDF15Q99988 308 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 MYH4Q9Y623 1939 aa13.17□□□□□ -0.3
KLHDC4-209ENST00000562872 SLC25A27O95847 323 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 IGHDP01880 384 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 FCER1AP12319 257 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 MAGEA10P43363 369 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 TFAP4Q01664 338 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 LRRFIP1Q32MZ4 808 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 GJC2Q5T442 439 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 B4GALNT3Q6L9W6 998 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 MKL1Q969V6 931 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 LENG1Q96BZ8 264 aaPredicted RBP13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
KLHDC4-209ENST00000562872 TTLL1O95922 423 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms