RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 TMEM87AQ8NBN3 555 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
SPG7-206ENST00000562775 A0A1W2PRG0 241 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 PRPF40AO75400 957 aaKnown RBP16.21■□□□□ 0.19
SPG7-206ENST00000562775 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■■■□□ 17.6
SPG7-206ENST00000562775 SLC1A4P43007 532 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
SPG7-206ENST00000562775 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
SPG7-206ENST00000562775 GMCL1Q96IK5 515 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 UBA5Q9GZZ9 404 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 GPCPD1Q9NPB8 672 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 ZNF112Q9UJU3 913 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 SCN4AP35499 1836 aa16.21■□□□□ 0.19
SPG7-206ENST00000562775 KIF28PB7ZC32 967 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 NDUFB10O96000 172 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 SKOR2Q2VWA4 1001 aaPredicted RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 PRAMEF18Q5VWM3 479 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 SULF1Q8IWU6 871 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 PIBF1Q8WXW3 757 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 SHISA4Q96DD7 197 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 ZNF396Q96N95 335 aaPredicted RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 SCAND2PQ9GZW5 306 aaPredicted RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 CPVLQ9H3G5 476 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 CFAP45Q9UL16 551 aa16.21■□□□□ 0.18
SPG7-206ENST00000562775 POLR2AP24928 1970 aaKnown RBP16.21■□□□□ 0.18
SPG7-206ENST00000562775 ATAD5Q96QE3 1844 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 FIBPO43427 364 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 RAD21O60216 631 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 ECE1P42892 770 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 USP48Q86UV5 1035 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 ACER1Q8TDN7 264 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
SPG7-206ENST00000562775 GOPCQ9HD26 462 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
SPG7-206ENST00000562775 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
SPG7-206ENST00000562775 MYH15Q9Y2K3 1946 aa16.2■□□□□ 0.18
SPG7-206ENST00000562775 BTBD18B2RXH4 712 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 TRAK2O60296 914 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
SPG7-206ENST00000562775 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 TTBK2Q6IQ55 1244 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 PIGSQ96S52 555 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
SPG7-206ENST00000562775 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
SPG7-206ENST00000562775 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 BMP3P12645 472 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 INPP5BP32019 993 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 HOMER1Q86YM7 354 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 SCYL3Q8IZE3 742 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
SPG7-206ENST00000562775 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 JMJD4Q9H9V9 463 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 BRMS1Q9HCU9 246 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 BARHL2Q9NY43 387 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
SPG7-206ENST00000562775 ELP1O95163 1332 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
SPG7-206ENST00000562775 POTECB2RU33 542 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 CALML3P27482 149 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 KRT2P35908 639 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 NLRP5P59047 1200 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 WWC2Q6AWC2 1192 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 KRT26Q7Z3Y9 468 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 PNMA8AQ86V59 439 aaPredicted RBP16.17■□□□□ 0.18
SPG7-206ENST00000562775 ADGRF4Q8IZF3 695 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 CCDC148Q8NFR7 591 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 GPKOWQ92917 476 aaPredicted RBP eCLIP16.17■□□□□ 0.18
SPG7-206ENST00000562775 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 MTMR8Q96EF0 704 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 WRNIP1Q96S55 665 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 ISY1Q9ULR0 285 aaKnown RBP16.17■□□□□ 0.18
SPG7-206ENST00000562775 SSC5DA1L4H1 1573 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 STXBP3O00186 592 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 SLC16A2P36021 539 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 NPY5RQ15761 445 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 CCDC12Q8WUD4 166 aaPredicted RBP16.17■□□□□ 0.18
SPG7-206ENST00000562775 LEO1Q8WVC0 666 aaPredicted RBP16.17■□□□□ 0.18
SPG7-206ENST00000562775 SPATA32Q96LK8 384 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 USP28Q96RU2 1077 aa16.17■□□□□ 0.18
SPG7-206ENST00000562775 DDX49Q9Y6V7 483 aaKnown RBP16.17■□□□□ 0.18
SPG7-206ENST00000562775 DOCK1Q14185 1865 aa16.16■□□□□ 0.18
SPG7-206ENST00000562775 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms