RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 COA7Q96BR5 231 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
CCNDBP1-203ENST00000562553 ZNF213O14771 459 aa18.2■□□□□ 0.5
CCNDBP1-203ENST00000562553 SGSM2O43147 1006 aa18.2■□□□□ 0.5
CCNDBP1-203ENST00000562553 PTH1RQ03431 593 aa18.2■□□□□ 0.5
CCNDBP1-203ENST00000562553 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
CCNDBP1-203ENST00000562553 MFSD6Q6ZSS7 791 aa18.19■□□□□ 0.5
CCNDBP1-203ENST00000562553 TMEM106CQ9BVX2 250 aa18.19■□□□□ 0.5
CCNDBP1-203ENST00000562553 GJD2Q9UKL4 321 aa18.19■□□□□ 0.5
CCNDBP1-203ENST00000562553 STX8Q9UNK0 236 aa18.19■□□□□ 0.5
CCNDBP1-203ENST00000562553 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 MAPK4P31152 587 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 GRK4P32298 578 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 NOVP48745 357 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 RASGRP2Q7LDG7 609 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 GPR142Q7Z601 462 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 GMCL1P1Q8NEA9 526 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 CHMP4CQ96CF2 233 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 RNF41Q9H4P4 317 aaPredicted RBP18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 PPP1R9AQ9ULJ8 1098 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 SYNPO2Q9UMS6 1093 aa18.18■□□□□ 0.5
CCNDBP1-203ENST00000562553 ADCY3O60266 1144 aa18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 PCP11498 1178 aaKnown RBP18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 ELNP15502 786 aa18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 EN2P19622 333 aaPredicted RBP18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 IRF5Q13568 498 aa18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
CCNDBP1-203ENST00000562553 CCNA1P78396 465 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 TMEM132BQ14DG7 1078 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 WDR78Q5VTH9 848 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 PLEKHH3Q7Z736 793 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 CCAR1Q8IX12 1150 aaKnown RBP18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 MB21D1Q8N884 522 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 SLAIN1Q8ND83 568 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 MOV10L1Q9BXT6 1211 aaKnown RBP18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 SPATC1LQ9H0A9 340 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 TCP11L1Q9NUJ3 509 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
CCNDBP1-203ENST00000562553 B4E1Z4 1266 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 PLS1Q14651 629 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 MTFR1Q15390 333 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 MORN1Q5T089 497 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 ESR2Q92731 530 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 SLF1Q9BQI6 1058 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 ZKSCAN3Q9BRR0 538 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 ESYT1Q9BSJ8 1104 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 MTMR7Q9Y216 660 aa18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 ZNFX1Q9P2E3 1918 aaKnown RBP18.15■□□□□ 0.5
CCNDBP1-203ENST00000562553 VWA5AO00534 786 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 KDM4AO75164 1064 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 BMP3P12645 472 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 CYP2B6P20813 491 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 MCCP23508 829 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 RCSD1Q6JBY9 416 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 PXYLP1Q8TE99 480 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 USP6NLQ92738 828 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 NUDT12Q9BQG2 462 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 CWC22Q9HCG8 908 aaKnown RBP18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 ZNF236Q9UL36 1845 aa18.14■□□□□ 0.49
CCNDBP1-203ENST00000562553 INHAP05111 366 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 CYP21A2P08686 494 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 ERCC3P19447 782 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 SLC1A4P43007 532 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 SOCS4Q8WXH5 440 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 KIFC2Q96AC6 838 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 GMCL1Q96IK5 515 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 PPP4R2Q9NY27 417 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 BIN2Q9UBW5 565 aaPredicted RBP18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 FEM1BQ9UK73 627 aa18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 ZNF214Q9UL59 606 aaPredicted RBP18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 ISY1Q9ULR0 285 aaKnown RBP18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
CCNDBP1-203ENST00000562553 TMEM232C9JQI7 657 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 PTPREP23469 700 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 TRIM32Q13049 653 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 KCTD1Q719H9 257 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 SHCBP1Q8NEM2 672 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 TRIB2Q92519 343 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 LSG1Q9H089 658 aaKnown RBP18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 RBM8AQ9Y5S9 174 aaKnown RBP18.12■□□□□ 0.49
CCNDBP1-203ENST00000562553 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 RGS2P41220 211 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 UBXN2AP68543 259 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 MAP2K5Q13163 448 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 GRB14Q14449 540 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 CCL14Q16627 93 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 ERICH6BQ5W0A0 696 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 NCAPG2Q86XI2 1143 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 PRPF38AQ8NAV1 312 aaKnown RBP18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 UNC93B1Q9H1C4 597 aa18.11■□□□□ 0.49
CCNDBP1-203ENST00000562553 ZSWIM5Q9P217 1185 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms