RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 PRDM10Q9NQV6 1147 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
IFT140-205ENST00000561954 SPDYE16A6NNV3 312 aaPredicted RBP16.4■□□□□ 0.22
IFT140-205ENST00000561954 BCRP11274 1271 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 STAT2P52630 851 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 LBX1P52954 281 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 ANAPC15P60006 121 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 SP3Q02447 781 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 KIF22Q14807 665 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 SEC23AQ15436 765 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 CCDC96Q2M329 555 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
IFT140-205ENST00000561954 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 FAM160B2Q86V87 743 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 ZNF296Q8WUU4 475 aaPredicted RBP16.4■□□□□ 0.22
IFT140-205ENST00000561954 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
IFT140-205ENST00000561954 ANTXR2P58335 489 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 IKQ13123 557 aaPredicted RBP16.39■□□□□ 0.21
IFT140-205ENST00000561954 BLOC1S2Q6QNY1 142 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 TMTC2Q8N394 836 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 NKX2-3Q8TAU0 364 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
IFT140-205ENST00000561954 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
IFT140-205ENST00000561954 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
IFT140-205ENST00000561954 MORF4L1Q9UBU8 362 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
IFT140-205ENST00000561954 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
IFT140-205ENST00000561954 PLA2G6O60733 806 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 FDX1P10109 184 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 PDHBP11177 359 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 DSG3P32926 999 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 CCNA1P78396 465 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 ASPRV1Q53RT3 343 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
IFT140-205ENST00000561954 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 PRPF38AQ8NAV1 312 aaKnown RBP16.38■□□□□ 0.21
IFT140-205ENST00000561954 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 P2RX7Q99572 595 aaKnown RBP16.38■□□□□ 0.21
IFT140-205ENST00000561954 R3HDMLQ9H3Y0 253 aa16.38■□□□□ 0.21
IFT140-205ENST00000561954 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 DDAH1O94760 285 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 LIFRP42702 1097 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 ERVK-24P63145 666 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
IFT140-205ENST00000561954 FGD1P98174 961 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 NFXL1Q6ZNB6 911 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 GPRC5AQ8NFJ5 357 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 PAGR1Q9BTK6 254 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
IFT140-205ENST00000561954 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
IFT140-205ENST00000561954 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 GNRH1P01148 92 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
IFT140-205ENST00000561954 COPB2P35606 906 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 FCGRTP55899 365 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
IFT140-205ENST00000561954 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 VWA5AO00534 786 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 ZBED4O75132 1171 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
IFT140-205ENST00000561954 CALM1P0DP23 149 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 CALM2P0DP24 149 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 CALM3P0DP25 149 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
IFT140-205ENST00000561954 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 CCAR1Q8IX12 1150 aaKnown RBP16.35■□□□□ 0.21
IFT140-205ENST00000561954 CD99L2Q8TCZ2 262 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 KIFC2Q96AC6 838 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 MAP3K14Q99558 947 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
IFT140-205ENST00000561954 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
IFT140-205ENST00000561954 MAPK4P31152 587 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 KIF5BP33176 963 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 OAZ1P54368 228 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
IFT140-205ENST00000561954 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 CTU1Q7Z7A3 348 aaKnown RBP16.34■□□□□ 0.21
IFT140-205ENST00000561954 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
IFT140-205ENST00000561954 TEX13BQ9BXU2 312 aa16.34■□□□□ 0.21
IFT140-205ENST00000561954 TXNRD2Q9NNW7 524 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms