RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 VCPKMTQ9H867 229 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 MKNK2Q9HBH9 465 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 EPB41L4AQ9HCS5 686 aaPredicted RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 FLRT1Q9NZU1 646 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 RANBP2P49792 3224 aaKnown RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 TRIOBPQ9H2D6 2365 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 GSG1L2A8MUP6 293 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 ERC2O15083 957 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 EVI5O60447 810 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 GLRX3O76003 335 aaKnown RBP9.87□□□□□ -0.83
GINS3-204ENST00000561952 MX1P20591 662 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 PTPREP23469 700 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 CNGA1P29973 690 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 MAP2K5Q13163 448 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 COG2Q14746 738 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 CCDC129Q6ZRS4 1044 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 NCAPG2Q86XI2 1143 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 SIAH1Q8IUQ4 282 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 C7orf61Q8IZ16 206 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 NPLOC4Q8TAT6 608 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 PI4K2BQ8TCG2 481 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 USP6NLQ92738 828 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 CHMP4CQ96CF2 233 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 CCDC17Q96LX7 622 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 NUP88Q99567 741 aaPredicted RBP9.87□□□□□ -0.83
GINS3-204ENST00000561952 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
GINS3-204ENST00000561952 SPATC1LQ9H0A9 340 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 CRISPLD2Q9H0B8 497 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 FBXO28Q9NVF7 368 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 PCDHB13Q9Y5F0 798 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 PLXNA1Q9UIW2 1896 aa9.87□□□□□ -0.83
GINS3-204ENST00000561952 SZT2Q5T011 3432 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 DNAH12Q6ZR08 3092 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 TTC41PQ6P2S7 1318 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 WDR46O15213 610 aaKnown RBP9.86□□□□□ -0.83
GINS3-204ENST00000561952 XRCC5P13010 732 aaKnown RBP9.86□□□□□ -0.83
GINS3-204ENST00000561952 ERCC3P19447 782 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 RASA1P20936 1047 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 CYP2C19P33261 490 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 SLC4A3P48751 1232 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 FAM83BQ5T0W9 1011 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 MAP3K21Q5TCX8 1036 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 LBX2Q6XYB7 198 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 NECAB2Q7Z6G3 386 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 DPP9Q86TI2 863 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 LPAR1Q92633 364 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 GOPCQ9HD26 462 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 ISY1Q9ULR0 285 aaKnown RBP9.86□□□□□ -0.83
GINS3-204ENST00000561952 ZMYND8Q9ULU4 1186 aaPredicted RBP9.86□□□□□ -0.83
GINS3-204ENST00000561952 NR2E3Q9Y5X4 410 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 ZNF236Q9UL36 1845 aa9.86□□□□□ -0.83
GINS3-204ENST00000561952 SLC15A5A6NIM6 579 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 ST18O60284 1047 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 ZFYP08048 801 aaPredicted RBP9.85□□□□□ -0.83
GINS3-204ENST00000561952 ADORA2AP29274 412 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 GRB14Q14449 540 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 LRRFIP1Q32MZ4 808 aaKnown RBP9.85□□□□□ -0.83
GINS3-204ENST00000561952 MFSD14CQ5VZR4 134 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 TRMT44Q8IYL2 757 aaKnown RBP9.85□□□□□ -0.83
GINS3-204ENST00000561952 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.85□□□□□ -0.83
GINS3-204ENST00000561952 NAPBQ9H115 298 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 C11orf49Q9H6J7 331 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 KANSL2Q9H9L4 492 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 HOXC10Q9NYD6 342 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 RBM27Q9P2N5 1060 aaKnown RBP9.85□□□□□ -0.83
GINS3-204ENST00000561952 ROBO3Q96MS0 1386 aa9.85□□□□□ -0.83
GINS3-204ENST00000561952 LAMA3Q16787 3333 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 SYN1P17600 705 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 GNAT2P19087 354 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 FXR1P51114 621 aaKnown RBP eCLIP9.84□□□□□ -0.83
GINS3-204ENST00000561952 TMEM132BQ14DG7 1078 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 SBK1Q52WX2 424 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 FAM47AQ5JRC9 791 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 IFNL3Q8IZI9 196 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 ZNF444Q8N0Y2 327 aaPredicted RBP9.84□□□□□ -0.83
GINS3-204ENST00000561952 LRRC47Q8N1G4 583 aaKnown RBP9.84□□□□□ -0.83
GINS3-204ENST00000561952 ANKLE1Q8NAG6 615 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 LNPKQ9C0E8 428 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 NBPF3Q9H094 633 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 OGDHLQ9ULD0 1010 aa9.84□□□□□ -0.83
GINS3-204ENST00000561952 PFASO15067 1338 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 PATL2C9JE40 543 aaKnown RBP9.83□□□□□ -0.84
GINS3-204ENST00000561952 COBLO75128 1261 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 NDUFB10O96000 172 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 PGK2P07205 417 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 CTDSPL2Q05D32 466 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 ZMYM1Q5SVZ6 1142 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 PRAMEF19Q5SWL8 479 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 GIMAP6Q6P9H5 292 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 MB21D1Q8N884 522 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 TRPV1Q8NER1 839 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 MMP19Q99542 508 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 NACAP1Q9BZK3 213 aa9.83□□□□□ -0.84
GINS3-204ENST00000561952 CLIP2Q9UDT6 1046 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms