RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 AOC3Q16853 763 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FOXD4L6Q3SYB3 417 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FAM47AQ5JRC9 791 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 CDC42EP5Q6NZY7 148 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FOXD4L3Q6VB84 417 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 C16orf86Q6ZW13 317 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 TTC6Q86TZ1 520 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FERMT3Q86UX7 667 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 MICU3Q86XE3 530 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 ANKLE1Q8NAG6 615 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FAM184AQ8NB25 1140 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 SLC44A5Q8NCS7 719 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 SUPT20HQ8NEM7 779 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 FBXO18Q8NFZ0 1043 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 SHISA4Q96DD7 197 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 ZDHHC15Q96MV8 337 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 AIFM3Q96NN9 605 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 GMLQ99445 158 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 TMX4Q9H1E5 349 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 ZSCAN16Q9H4T2 348 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 IGSF5Q9NSI5 407 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 NAP1L2Q9ULW6 460 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 TTF2Q9UNY4 1162 aaKnown RBP7.61□□□□□ -1.19
CAPN3-210ENST00000561817 PCDHAC2Q9Y5I4 1007 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 ATP6V1DQ9Y5K8 247 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 SLC12A7Q9Y666 1083 aa7.61□□□□□ -1.19
CAPN3-210ENST00000561817 GREB1LQ9C091 1923 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 ELP1O95163 1332 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 CCDC69A6NI79 296 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 DDAH1O94760 285 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 SLC3A2P08195 630 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 GUCY1A2P33402 732 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 CRKP46108 304 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 CDK8P49336 464 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 SCNN1DP51172 638 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 PDE4BQ07343 736 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 SART3Q15020 963 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 PPP2R5BQ15173 497 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 RTN1Q16799 776 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 OTUD7BQ6GQQ9 843 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 NFXL1Q6ZNB6 911 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 CRACR2BQ8N4Y2 399 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 KRI1Q8N9T8 703 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 FANCBQ8NB91 859 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 PHKBQ93100 1093 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 NOL10Q9BSC4 688 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 UBAC1Q9BSL1 405 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 VPS33BQ9H267 617 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 TOMM22Q9NS69 142 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 GJB4Q9NTQ9 266 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 TMEM63CQ9P1W3 806 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 SAP30BPQ9UHR5 308 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 KIF3AQ9Y496 699 aa7.6□□□□□ -1.19
CAPN3-210ENST00000561817 DDX49Q9Y6V7 483 aaKnown RBP7.6□□□□□ -1.19
CAPN3-210ENST00000561817 PLIN4Q96Q06 1357 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 IGKV6D-41A0A0C4DH26 115 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 ERICH2A1L162 156 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 KIF28PB7ZC32 967 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 F8W031 263 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 CPLX1O14810 134 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 PPIP5K2O43314 1243 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 CDKL5O76039 1030 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 S1PR4O95977 384 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 MBD3O95983 291 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 ADH1BP00325 375 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 VIL1P09327 827 aaKnown RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 ZNF445P59923 1031 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 UBE2HP62256 183 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 TFAP4Q01664 338 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 GUCY1B3Q02153 619 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 KIF23Q02241 960 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 NFIAQ12857 509 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 PKN1Q16512 942 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 SLC35G1Q2M3R5 365 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 SLC4A8Q2Y0W8 1093 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 IFIT1BQ5T764 474 aaKnown RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 IQCA1Q86XH1 822 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 GAS2L3Q86XJ1 694 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 DGKHQ86XP1 1220 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 ZFPM1Q8IX07 1006 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 CCDC144CPQ8IYA2 1237 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 NEDD1Q8NHV4 660 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 LEO1Q8WVC0 666 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 ZNF592Q92610 1267 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 TEKT1Q969V4 418 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 C8orf76Q96K31 380 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 MAP3K14Q99558 947 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 IDI2Q9BXS1 227 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 USP40Q9NVE5 1235 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 RCOR1Q9UKL0 485 aa7.59□□□□□ -1.19
CAPN3-210ENST00000561817 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-210ENST00000561817 MYO3BQ8WXR4 1341 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 COL2A1P02458 1487 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 H3BQV1 296 aa7.58□□□□□ -1.2
CAPN3-210ENST00000561817 PRPF3O43395 683 aaKnown RBP7.58□□□□□ -1.2
CAPN3-210ENST00000561817 FIBPO43427 364 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms