RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ABRAQ8N0Z2 381 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 MB21D1Q8N884 522 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 ADAMTS19Q8TE59 1207 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 GAS2L1Q99501 681 aaPredicted RBP22.12■■□□□ 1.13
COMMD4-204ENST00000561662 MMP19Q99542 508 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 RIOK1Q9BRS2 568 aaKnown RBP22.12■■□□□ 1.13
COMMD4-204ENST00000561662 MCM9Q9NXL9 1143 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 MYO9BQ13459 2157 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 EAF2Q96CJ1 260 aaPredicted RBP22.11■■□□□ 1.13
COMMD4-204ENST00000561662 DYNLL2Q96FJ2 89 aa22.11■■□□□ 1.13
COMMD4-204ENST00000561662 TINF2Q9BSI4 451 aa22.11■■□□□ 1.13
COMMD4-204ENST00000561662 PBX4Q9BYU1 374 aa22.11■■□□□ 1.13
COMMD4-204ENST00000561662 STARD7Q9NQZ5 370 aa22.11■■□□□ 1.13
COMMD4-204ENST00000561662 ZNFX1Q9P2E3 1918 aaKnown RBP22.1■■□□□ 1.13
COMMD4-204ENST00000561662 DCDC2CA8MYV0 355 aa22.1■■□□□ 1.13
COMMD4-204ENST00000561662 ZNF865P0CJ78 1059 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-204ENST00000561662 IRX5P78411 483 aaPredicted RBP22.1■■□□□ 1.13
COMMD4-204ENST00000561662 MAP3K12Q12852 859 aa22.1■■□□□ 1.13
COMMD4-204ENST00000561662 C16orf59Q7L2K0 433 aa22.1■■□□□ 1.13
COMMD4-204ENST00000561662 ASB2Q96Q27 587 aa22.1■■□□□ 1.13
COMMD4-204ENST00000561662 FBXO28Q9NVF7 368 aa22.1■■□□□ 1.13
COMMD4-204ENST00000561662 MAGEB6P1A0A0J9YX57 407 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 ADAMTS4O75173 837 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 ACRP10323 421 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 IGFBP4P22692 258 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 ACLYP53396 1101 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 CERS3Q8IU89 383 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 SIAH1Q8IUQ4 282 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 SDR42E1Q8WUS8 393 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 THEGQ9P2T0 379 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 NAV1Q8NEY1 1877 aa22.09■■□□□ 1.13
COMMD4-204ENST00000561662 MYADML2A6NDP7 307 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 TIMP1P01033 207 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 AKR1B1P15121 316 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 ADGRE1Q14246 886 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 ZNF792Q3KQV3 632 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 ANKRD33Q7Z3H0 272 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 TMEM57Q8N5G2 664 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 SSH3Q8TE77 659 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 ATXN2LQ8WWM7 1075 aaKnown RBP22.08■■□□□ 1.13
COMMD4-204ENST00000561662 UHRF1Q96T88 793 aaPredicted RBP22.08■■□□□ 1.13
COMMD4-204ENST00000561662 PLXNA1Q9UIW2 1896 aa22.08■■□□□ 1.13
COMMD4-204ENST00000561662 SYNRGQ9UMZ2 1314 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 SMIM22K7EJ46 135 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 AKR1A1P14550 325 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 ICA1Q05084 483 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 KCTD2Q14681 263 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 KCNA10Q16322 511 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 TMEM240Q5SV17 173 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 TMEM179Q6ZVK1 233 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 NECAB3Q96P71 396 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-204ENST00000561662 PPP1R12CQ9BZL4 782 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 NRBP1Q9UHY1 535 aa22.07■■□□□ 1.12
COMMD4-204ENST00000561662 RAD21O60216 631 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 IGSF3O75054 1194 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 SLC25A27O95847 323 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 CSF2RAP15509 400 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 ATP8B2P98198 1209 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 TOX2Q96NM4 488 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 CRNKL1Q9BZJ0 848 aaKnown RBP22.06■■□□□ 1.12
COMMD4-204ENST00000561662 VCPKMTQ9H867 229 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 TBX21Q9UL17 535 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 CNPY2Q9Y2B0 182 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 CHD9Q3L8U1 2897 aa22.06■■□□□ 1.12
COMMD4-204ENST00000561662 COL11A1P12107 1806 aaPredicted RBP22.06■■□□□ 1.12
COMMD4-204ENST00000561662 XIRP2A4UGR9 3374 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 APBB1O00213 710 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
COMMD4-204ENST00000561662 PLA2G5P39877 138 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 MRPS5P82675 430 aaKnown RBP22.05■■□□□ 1.12
COMMD4-204ENST00000561662 MFSD5Q6N075 450 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 NUP133Q8WUM0 1156 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 VTI1AQ96AJ9 217 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 FAM122AQ96E09 287 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 ARHGEF10LQ9HCE6 1279 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 ZHX1Q9UKY1 873 aaPredicted RBP22.05■■□□□ 1.12
COMMD4-204ENST00000561662 TMX2Q9Y320 296 aa22.05■■□□□ 1.12
COMMD4-204ENST00000561662 PPIGQ13427 754 aaKnown RBP eCLIP22.04■■□□□ 1.123e-9■■■■□ 19.9
COMMD4-204ENST00000561662 AKNAD1Q5T1N1 836 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 ZNF365Q70YC5 407 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 RIOX2Q8IUF8 465 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 LCORLQ8N3X6 602 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 IL27Q8NEV9 243 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 TSEN34Q9BSV6 310 aaKnown RBP22.04■■□□□ 1.12
COMMD4-204ENST00000561662 NKX2-4Q9H2Z4 354 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 DCP1AQ9NPI6 582 aaPredicted RBP22.04■■□□□ 1.12
COMMD4-204ENST00000561662 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
COMMD4-204ENST00000561662 CYP2D7A0A087X1C5 515 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 WDR46O15213 610 aaKnown RBP22.03■■□□□ 1.12
COMMD4-204ENST00000561662 PDE6AP16499 860 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 STAT3P40763 770 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 SLC9C2Q5TAH2 1124 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 AACSQ86V21 672 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 MICALL1Q8N3F8 863 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 KLHDC9Q8NEP7 349 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 BCL11AQ9H165 835 aa22.03■■□□□ 1.12
COMMD4-204ENST00000561662 ROBO3Q96MS0 1386 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 PARP14Q460N5 1801 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 VWA5AO00534 786 aa22.02■■□□□ 1.12
COMMD4-204ENST00000561662 SNAI1O95863 264 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms