RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 LTBP2Q14767 1821 aa30.25■■■□□ 2.43
NME3-202ENST00000561637 FAM109BQ6ICB4 259 aaPredicted RBP30.25■■■□□ 2.43
NME3-202ENST00000561637 SAMD1Q6SPF0 538 aaPredicted RBP30.25■■■□□ 2.43
NME3-202ENST00000561637 SENP6Q9GZR1 1112 aaPredicted RBP30.25■■■□□ 2.43
NME3-202ENST00000561637 FLRT1Q9NZU1 646 aa30.25■■■□□ 2.43
NME3-202ENST00000561637 ROBO3Q96MS0 1386 aa30.25■■■□□ 2.43
NME3-202ENST00000561637 FOXP2O15409 715 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 PRDM1O75626 825 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 APPP05067 770 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 TDO2P48775 406 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 GIMAP6Q6P9H5 292 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 A0A0G2JMZ2 1700 aa30.24■■■□□ 2.43
NME3-202ENST00000561637 PDE1AP54750 535 aa30.23■■■□□ 2.43
NME3-202ENST00000561637 MAP2K5Q13163 448 aa30.23■■■□□ 2.43
NME3-202ENST00000561637 ATG4CQ96DT6 458 aa30.23■■■□□ 2.43
NME3-202ENST00000561637 LNPKQ9C0E8 428 aa30.23■■■□□ 2.43
NME3-202ENST00000561637 PRUNE2Q8WUY3 3088 aa30.23■■■□□ 2.43
NME3-202ENST00000561637 COG2Q14746 738 aa30.22■■■□□ 2.43
NME3-202ENST00000561637 IFNL3Q8IZI9 196 aa30.22■■■□□ 2.43
NME3-202ENST00000561637 MOV10L1Q9BXT6 1211 aaKnown RBP30.22■■■□□ 2.43
NME3-202ENST00000561637 CWC22Q9HCG8 908 aaKnown RBP30.22■■■□□ 2.43
NME3-202ENST00000561637 FBXO28Q9NVF7 368 aa30.22■■■□□ 2.43
NME3-202ENST00000561637 PARP14Q460N5 1801 aa30.22■■■□□ 2.43
NME3-202ENST00000561637 PATL2C9JE40 543 aaKnown RBP30.21■■■□□ 2.43
NME3-202ENST00000561637 IGHDP01880 384 aa30.21■■■□□ 2.43
NME3-202ENST00000561637 KANSL2Q9H9L4 492 aa30.21■■■□□ 2.43
NME3-202ENST00000561637 FLOT1O75955 427 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 GNAT2P19087 354 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 PTPREP23469 700 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 DSG3P32926 999 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 ATN1P54259 1190 aaPredicted RBP30.2■■■□□ 2.43
NME3-202ENST00000561637 CCNA1P78396 465 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 B4GALNT3Q6L9W6 998 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 LPAR1Q92633 364 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 LBHD1Q9BQE6 289 aaPredicted RBP30.2■■■□□ 2.43
NME3-202ENST00000561637 MKNK2Q9HBH9 465 aa30.2■■■□□ 2.43
NME3-202ENST00000561637 ZBTB47Q9UFB7 747 aaPredicted RBP30.2■■■□□ 2.43
NME3-202ENST00000561637 RAD21O60216 631 aa30.19■■■□□ 2.42
NME3-202ENST00000561637 NUP88Q99567 741 aaPredicted RBP30.19■■■□□ 2.42
NME3-202ENST00000561637 SH2D4AQ9H788 454 aa30.19■■■□□ 2.42
NME3-202ENST00000561637 WDR46O15213 610 aaKnown RBP30.18■■■□□ 2.42
NME3-202ENST00000561637 NPLOC4Q8TAT6 608 aa30.18■■■□□ 2.42
NME3-202ENST00000561637 SPATC1LQ9H0A9 340 aa30.18■■■□□ 2.42
NME3-202ENST00000561637 HOXC10Q9NYD6 342 aa30.18■■■□□ 2.42
NME3-202ENST00000561637 DDX20Q9UHI6 824 aaKnown RBP30.18■■■□□ 2.42
NME3-202ENST00000561637 GRB14Q14449 540 aa30.17■■■□□ 2.42
NME3-202ENST00000561637 LRRFIP1Q32MZ4 808 aaKnown RBP30.17■■■□□ 2.42
NME3-202ENST00000561637 FAM83BQ5T0W9 1011 aa30.17■■■□□ 2.42
NME3-202ENST00000561637 VPS53Q5VIR6 699 aa30.17■■■□□ 2.42
NME3-202ENST00000561637 MFSD14CQ5VZR4 134 aa30.17■■■□□ 2.42
NME3-202ENST00000561637 SMC5Q8IY18 1101 aa30.17■■■□□ 2.42
NME3-202ENST00000561637 IGKV6D-41A0A0C4DH26 115 aa30.16■■■□□ 2.42
NME3-202ENST00000561637 SLC15A5A6NIM6 579 aa30.16■■■□□ 2.42
NME3-202ENST00000561637 PLS1Q14651 629 aa30.16■■■□□ 2.42
NME3-202ENST00000561637 INCENPQ9NQS7 918 aa30.16■■■□□ 2.42
NME3-202ENST00000561637 TACC3Q9Y6A5 838 aa30.16■■■□□ 2.42
NME3-202ENST00000561637 SPTBN5Q9NRC6 3674 aaKnown RBP30.16■■■□□ 2.42
NME3-202ENST00000561637 ERCC3P19447 782 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 CNGA1P29973 690 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 ZNF697Q5TEC3 545 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 TRPV1Q8NER1 839 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 EVI5LQ96CN4 794 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 FAM227BQ96M60 508 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 NAPBQ9H115 298 aa30.15■■■□□ 2.42
NME3-202ENST00000561637 COL11A1P12107 1806 aaPredicted RBP30.15■■■□□ 2.42
NME3-202ENST00000561637 CDH23Q9H251 3354 aa30.14■■■□□ 2.42
NME3-202ENST00000561637 CYP2C19P33261 490 aa30.14■■■□□ 2.42
NME3-202ENST00000561637 RTP1P59025 263 aa30.14■■■□□ 2.42
NME3-202ENST00000561637 TMEM132BQ14DG7 1078 aa30.14■■■□□ 2.42
NME3-202ENST00000561637 A0A0D9SFI3 127 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 PPARAQ07869 468 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 FAM47AQ5JRC9 791 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 CEP95Q96GE4 821 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 CDX2Q99626 313 aaPredicted RBP30.13■■■□□ 2.41
NME3-202ENST00000561637 NACAP1Q9BZK3 213 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 GOPCQ9HD26 462 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 NYAP2Q9P242 653 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 SUPT16HQ9Y5B9 1047 aaKnown RBP30.13■■■□□ 2.41
NME3-202ENST00000561637 IVNS1ABPQ9Y6Y0 642 aa30.13■■■□□ 2.41
NME3-202ENST00000561637 NDUFB10O96000 172 aa30.12■■■□□ 2.41
NME3-202ENST00000561637 CTDSPL2Q05D32 466 aa30.12■■■□□ 2.41
NME3-202ENST00000561637 SHHQ15465 462 aa30.12■■■□□ 2.41
NME3-202ENST00000561637 RWDD1Q9H446 243 aaPredicted RBP30.12■■■□□ 2.41
NME3-202ENST00000561637 CLIP2Q9UDT6 1046 aa30.12■■■□□ 2.41
NME3-202ENST00000561637 DNM1LO00429 736 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 COBLO75128 1261 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 HOXC6P09630 235 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 ADORA2AP29274 412 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 C9orf50Q5SZB4 431 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 GJC2Q5T442 439 aaPredicted RBP30.11■■■□□ 2.41
NME3-202ENST00000561637 NCAPG2Q86XI2 1143 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 LRRC47Q8N1G4 583 aaKnown RBP30.11■■■□□ 2.41
NME3-202ENST00000561637 MB21D1Q8N884 522 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 PPP1R9AQ9ULJ8 1098 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 ADAMTS5Q9UNA0 930 aa30.11■■■□□ 2.41
NME3-202ENST00000561637 MYH4Q9Y623 1939 aa30.1■■■□□ 2.41
NME3-202ENST00000561637 IGHA2P01877 340 aa30.1■■■□□ 2.41
NME3-202ENST00000561637 ZNF444Q8N0Y2 327 aaPredicted RBP30.1■■■□□ 2.41
NME3-202ENST00000561637 SHCBP1Q8NEM2 672 aa30.1■■■□□ 2.41
NME3-202ENST00000561637 REPS2Q8NFH8 660 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms