RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 SNX12Q9UMY4 172 aa17.99■□□□□ 0.47
PBX1-219ENST00000560641 DOCK2Q92608 1830 aa17.99■□□□□ 0.47
PBX1-219ENST00000560641 TDO2P48775 406 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 C11orf91Q3C1V1 193 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 CCDC122Q5T0U0 273 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 LMBR1LQ6UX01 489 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 RETREG2Q8NC44 543 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 BTBD18B2RXH4 712 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 TBC1D10CQ8IV04 446 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 IQCKQ8N0W5 287 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 PLBD2Q8NHP8 589 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 PDS5AQ29RF7 1337 aaKnown RBP17.98■□□□□ 0.47
PBX1-219ENST00000560641 LSP1P33241 339 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 TIMM10P62072 90 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 ZNF512BQ96KM6 892 aaPredicted RBP17.98■□□□□ 0.47
PBX1-219ENST00000560641 NEUROD6Q96NK8 337 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 PCDHB6Q9Y5E3 794 aa17.98■□□□□ 0.47
PBX1-219ENST00000560641 A0A087WZG4 1122 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 ENC1O14682 589 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 HSF2BPO75031 334 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 SND1Q7KZF4 910 aaKnown RBP eCLIP17.97■□□□□ 0.47
PBX1-219ENST00000560641 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 FAXDC2Q96IV6 333 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 PUS7LQ9H0K6 701 aaKnown RBP17.97■□□□□ 0.47
PBX1-219ENST00000560641 VEZTQ9HBM0 779 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 GOLGA8AA7E2F4 631 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 LGALS16A8MUM7 142 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 KCNJ18B7U540 433 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 GPAA1O43292 621 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 RDXP35241 583 aaKnown RBP17.97■□□□□ 0.47
PBX1-219ENST00000560641 KCNJ12Q14500 433 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 PTGISQ16647 500 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 ZNF473Q8WTR7 871 aaKnown RBP17.97■□□□□ 0.47
PBX1-219ENST00000560641 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
PBX1-219ENST00000560641 TTC26A0AVF1 554 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 H7C1D1 291 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 SRGAP2O75044 1071 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 BRD2P25440 801 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 CYLC1P35663 651 aaPredicted RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 CCDC40Q4G0X9 1142 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 PPP4R3AQ6IN85 833 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 MB21D1Q8N884 522 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 IQCDQ96DY2 449 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 FAM107AO95990 144 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 EEF1GP26641 437 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 FIGNQ5HY92 759 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 P3H4Q92791 437 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 ARL8AQ96BM9 186 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 PPP1R37O75864 691 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 DEXIO95424 95 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 PAK1Q13153 545 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 TLDC1Q6P9B6 456 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 CCDC13Q8IYE1 715 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 TEX11Q8IYF3 940 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 EIF1ADQ8N9N8 165 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 TSEN2Q8NCE0 465 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 TRIM58Q8NG06 486 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■■■■■ 64.2
PBX1-219ENST00000560641 NUP58Q9BVL2 599 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 SLC52A2Q9HAB3 445 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 STIM2Q9P246 746 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 CTNND2Q9UQB3 1225 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 LUC7L2Q9Y383 392 aaKnown RBP17.96■□□□□ 0.47
PBX1-219ENST00000560641 SAMM50Q9Y512 469 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
PBX1-219ENST00000560641 RREB1Q92766 1687 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 BCORQ6W2J9 1755 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 DLEC1Q9Y238 1755 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 USP49Q70CQ1 688 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 RRP36Q96EU6 259 aaKnown RBP17.95■□□□□ 0.46
PBX1-219ENST00000560641 A0A1W2PQJ5 194 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 LCA5LO95447 670 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 CDC25AP30304 524 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 STX17P56962 302 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 ZNF658Q5TYW1 1059 aaPredicted RBP17.95■□□□□ 0.46
PBX1-219ENST00000560641 GDF3Q9NR23 364 aa17.95■□□□□ 0.46
PBX1-219ENST00000560641 H0YHG0 523 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 NF2P35240 595 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 CCT6AP40227 531 aaKnown RBP17.94■□□□□ 0.46
PBX1-219ENST00000560641 C2orf54Q08AI8 447 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 LACTB2Q53H82 288 aaPredicted RBP17.94■□□□□ 0.46
PBX1-219ENST00000560641 RTN2O75298 545 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 VAV2P52735 878 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 IFFO1Q0D2I5 559 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 SPATA4Q8NEY3 305 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 SLC26A6Q9BXS9 759 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 ATP6V0A4Q9HBG4 840 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 XDHP47989 1333 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 TCP1P17987 556 aaKnown RBP17.94■□□□□ 0.46
PBX1-219ENST00000560641 HNRNPH3P31942 346 aaKnown RBP17.94■□□□□ 0.46
PBX1-219ENST00000560641 PDCLQ13371 301 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 HAUS3Q68CZ6 603 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 IRF2BP1Q8IU81 584 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 NKX2-3Q8TAU0 364 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
PBX1-219ENST00000560641 ZIM3Q96PE6 472 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms