RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TBC1D2Q9BYX2 928 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 SPTBN2O15020 2390 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 CEP250Q9BV73 2442 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 PTPRFP10586 1907 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 SPEGQ15772 3267 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 SNAP23O00161 211 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 PCCAP05165 728 aaPredicted RBP8.29□□□□□ -1.08
HERC1-208ENST00000560462 HDLBPQ00341 1268 aaKnown RBP8.29□□□□□ -1.08
HERC1-208ENST00000560462 TCP10Q12799 353 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 KIAA0319Q5VV43 1072 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 RNF180Q86T96 592 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 LURAP1LQ8IV03 231 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 WWC1Q8IX03 1113 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 GDPD5Q8WTR4 605 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 ZDHHC15Q96MV8 337 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 GREM2Q9H772 168 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 STARD7Q9NQZ5 370 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 SPEF2Q9C093 1822 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 MROH7Q68CQ1 1323 aa8.29□□□□□ -1.08
HERC1-208ENST00000560462 ARHGEF15O94989 841 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 SEC24BO95487 1268 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 HOXC6P09630 235 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 CYP2C18P33260 490 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 HMGCS2P54868 508 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 HERVK_113P62684 666 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 ERVK-24P63145 666 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 CHRNDQ07001 517 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 PDE4CQ08493 712 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 SIGLEC14Q08ET2 396 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 CCDC84Q86UT8 332 aaPredicted RBP8.28□□□□□ -1.08
HERC1-208ENST00000560462 TTLL11Q8NHH1 800 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
HERC1-208ENST00000560462 XPNPEP3Q9NQH7 507 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 SNRKQ9NRH2 765 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
HERC1-208ENST00000560462 ZZEF1O43149 2961 aa8.28□□□□□ -1.08
HERC1-208ENST00000560462 COL4A4P53420 1690 aaPredicted RBP8.27□□□□□ -1.08
HERC1-208ENST00000560462 SLC15A5A6NIM6 579 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 COL9A3Q14050 684 aaPredicted RBP8.27□□□□□ -1.09
HERC1-208ENST00000560462 RSPO4Q2I0M5 234 aaPredicted RBP8.27□□□□□ -1.09
HERC1-208ENST00000560462 Q3C1V9 767 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 APOBEC3HQ6NTF7 200 aaKnown RBP8.27□□□□□ -1.09
HERC1-208ENST00000560462 PADI6Q6TGC4 694 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 KCNG4Q8TDN1 519 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 MPHOSPH8Q99549 860 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 RBPJLQ9UBG7 517 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 KNSTRNQ9Y448 316 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 LRRFIP2Q9Y608 721 aaKnown RBP8.27□□□□□ -1.09
HERC1-208ENST00000560462 NDUFB9Q9Y6M9 179 aa8.27□□□□□ -1.09
HERC1-208ENST00000560462 CTNND1O60716 968 aaKnown RBP8.26□□□□□ -1.09
HERC1-208ENST00000560462 TAF5LO75529 589 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 IGHA2P01877 340 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 ADRB1P08588 477 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 RARBP10826 455 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 SPP2Q13103 211 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 WDR78Q5VTH9 848 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 EP400NLQ6ZTU2 488 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 NPLOC4Q8TAT6 608 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 SLC39A7Q92504 469 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 ASIC4Q96FT7 647 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 PAGR1Q9BTK6 254 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 IVNS1ABPQ9Y6Y0 642 aa8.26□□□□□ -1.09
HERC1-208ENST00000560462 LOC285556D6RIA3 1793 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 PHIPQ8WWQ0 1821 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 KIF28PB7ZC32 967 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 PGK1P00558 417 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 PTPREP23469 700 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 ACLYP53396 1101 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 SMAD2Q15796 467 aaKnown RBP8.25□□□□□ -1.09
HERC1-208ENST00000560462 GRIK5Q16478 980 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 C6orf132Q5T0Z8 1188 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 OLFML2BQ68BL8 750 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 SPRED2Q7Z698 418 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 RPUSD2Q8IZ73 545 aaKnown RBP8.25□□□□□ -1.09
HERC1-208ENST00000560462 RETREG2Q8NC44 543 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 CCDC191Q8NCU4 936 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
HERC1-208ENST00000560462 TLR3O15455 904 aaKnown RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 LMNAP02545 664 aaKnown RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 C7P10643 843 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 SDHBP21912 280 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 FOSBP53539 338 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 CCNA1P78396 465 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 GRB14Q14449 540 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 PABPC5Q96DU9 382 aaKnown RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 SLC9A7Q96T83 725 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 HINFPQ9BQA5 517 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 TSEN34Q9BSV6 310 aaKnown RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 MRIQ9BWK5 157 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 HIPK3Q9H422 1215 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
HERC1-208ENST00000560462 TSPYL4Q9UJ04 414 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 PCDHGA4Q9Y5G9 962 aa8.24□□□□□ -1.09
HERC1-208ENST00000560462 STXBP3O00186 592 aa8.23□□□□□ -1.09
HERC1-208ENST00000560462 SPTLC1O15269 473 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms