RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ACRP10323 421 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 BMP1P13497 986 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 CSF2RAP15509 400 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 MCAMP43121 646 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 ACLYP53396 1101 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 PPP4CP60510 307 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 TFF2Q03403 129 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 ZKSCAN2Q63HK3 967 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 TATDN1Q6P1N9 297 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 TTC6Q86TZ1 520 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
SMAD3-215ENST00000560424 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 MMP19Q99542 508 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 TSEN34Q9BSV6 310 aaKnown RBP11.29□□□□□ -0.6
SMAD3-215ENST00000560424 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
SMAD3-215ENST00000560424 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 MPHOSPH10O00566 681 aaKnown RBP11.28□□□□□ -0.6
SMAD3-215ENST00000560424 KCNQ1P51787 676 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 KCTD2Q14681 263 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 SNRKQ9NRH2 765 aa11.28□□□□□ -0.6
SMAD3-215ENST00000560424 FLOT1O75955 427 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 SLC25A27O95847 323 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 IRX6P78412 446 aaPredicted RBP11.27□□□□□ -0.61
SMAD3-215ENST00000560424 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 CERS3Q8IU89 383 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 EHD4Q9H223 541 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 TBX21Q9UL17 535 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 MYH1P12882 1939 aa11.27□□□□□ -0.61
SMAD3-215ENST00000560424 SMCHD1A6NHR9 2005 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 ERC2O15083 957 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 ADAMTS4O75173 837 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 FGBP02675 491 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 PGK2P07205 417 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 DYNLL1P63167 89 aaKnown RBP11.26□□□□□ -0.61
SMAD3-215ENST00000560424 G3BP1Q13283 466 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMAD3-215ENST00000560424 KCNA10Q16322 511 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 C20orf194Q5TEA3 1177 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 RASIP1Q5U651 963 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 PCSK9Q8NBP7 692 aaKnown RBP11.26□□□□□ -0.61
SMAD3-215ENST00000560424 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
SMAD3-215ENST00000560424 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 FAM184BQ9ULE4 1060 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 SYNRGQ9UMZ2 1314 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 ROBO3Q96MS0 1386 aa11.26□□□□□ -0.61
SMAD3-215ENST00000560424 A0A0U1RQG5 324 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 IGSF3O75054 1194 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 POLR3DP05423 398 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 C6orf222P0C671 652 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 TRIM27P14373 513 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 CYP7A1P22680 504 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 DSG3P32926 999 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 SEPT2Q15019 361 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 OTOP2Q7RTS6 562 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 SH2D4AQ9H788 454 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 ZHX1Q9UKY1 873 aaPredicted RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 COG5Q9UP83 839 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 DIS3Q9Y2L1 958 aaKnown RBP11.25□□□□□ -0.61
SMAD3-215ENST00000560424 ELP1O95163 1332 aa11.25□□□□□ -0.61
SMAD3-215ENST00000560424 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 FAM86C2PA6NEL3 165 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 ARVCFO00192 962 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 GPR37L1O60883 481 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 IDH1O75874 414 aaKnown RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 GNAI3P08754 354 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 ZNF865P0CJ78 1059 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 TAL1P17542 331 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 COPB2P35606 906 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 MIGA1Q8NAN2 632 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 API5Q9BZZ5 524 aaKnown RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 YBX2Q9Y2T7 364 aaKnown RBP11.24□□□□□ -0.61
SMAD3-215ENST00000560424 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
SMAD3-215ENST00000560424 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-215ENST00000560424 ASGR1P07306 291 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 CYP2C18P33260 490 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 RABGGTBP53611 331 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-215ENST00000560424 RPUSD2Q8IZ73 545 aaKnown RBP11.23□□□□□ -0.61
SMAD3-215ENST00000560424 SPICE1Q8N0Z3 855 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 MEIS3Q99687 375 aa11.23□□□□□ -0.61
SMAD3-215ENST00000560424 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
SMAD3-215ENST00000560424 GBF1Q92538 1859 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms