RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GTF3C6Q969F1 213 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 PPANQ9NQ55 473 aaKnown RBP14.91□□□□□ -0.02
TRAF3-208ENST00000560371 ZKSCAN5Q9Y2L8 839 aa14.91□□□□□ -0.02
TRAF3-208ENST00000560371 ARAP3Q8WWN8 1544 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 TMEM232C9JQI7 657 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 SORBS3O60504 671 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 RAD17O75943 681 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
TRAF3-208ENST00000560371 POLGP54098 1239 aaPredicted RBP14.9□□□□□ -0.02
TRAF3-208ENST00000560371 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
TRAF3-208ENST00000560371 SPICE1Q8N0Z3 855 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 NFE2L3Q9Y4A8 694 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 DMP1Q13316 513 aaPredicted RBP14.9□□□□□ -0.02
TRAF3-208ENST00000560371 FAM178BQ8IXR5 827 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 TIGD1Q96MW7 591 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 PPP2R5DQ14738 602 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 CC2D2BQ6DHV5 1058 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 GSDMBQ8TAX9 411 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 ATP7BP35670 1465 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 MED23Q9ULK4 1368 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 CRCPO75575 148 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 ABL1P00519 1130 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 POLA2Q14181 598 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 GPATCH4Q5T3I0 446 aaKnown RBP14.9□□□□□ -0.02
TRAF3-208ENST00000560371 GALNT17Q6IS24 598 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 NEK8Q86SG6 692 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 GOLGA8HP0CJ92 632 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 KCTD2Q14681 263 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 SAMD9LQ8IVG5 1584 aa14.9□□□□□ -0.02
TRAF3-208ENST00000560371 CYP2J2P51589 502 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 CTTNBP2NLQ9P2B4 639 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 SCG2P13521 617 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 FANCCQ00597 558 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 UTP14CQ5TAP6 766 aaKnown RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 KLHL30Q0D2K2 578 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ARHGAP44Q17R89 818 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 DALRD3Q5D0E6 543 aaKnown RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 LARSQ9P2J5 1176 aaKnown RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ARMC9Q7Z3E5 817 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 KRT222Q8N1A0 295 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 SEC62Q99442 399 aaKnown RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 V9GYY5 206 aaPredicted RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ADORA1P30542 326 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ADD1P35611 737 aaKnown RBP14.89□□□□□ -0.03
TRAF3-208ENST00000560371 CPLX4Q7Z7G2 160 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 NOSTRINQ8IVI9 506 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 ABCC4O15439 1325 aa14.89□□□□□ -0.03
TRAF3-208ENST00000560371 H0YCG3 227 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 TTLL1O95922 423 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 NLRP12P59046 1061 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ERFEQ4G0M1 354 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 PLA2G4DQ86XP0 818 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 MMS19Q96T76 1030 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 TEKT3Q9BXF9 490 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 THRAP3Q9Y2W1 955 aaKnown RBP14.88□□□□□ -0.03
TRAF3-208ENST00000560371 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ZEB2O60315 1214 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ITIH3Q06033 890 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ME3Q16798 604 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 PRDM10Q9NQV6 1147 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 UBE3CQ15386 1083 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CLUL1Q15846 466 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ARFGAP2Q8N6H7 521 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 MED10Q9BTT4 135 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 COPRSQ9NQ92 184 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 SERPINB13Q9UIV8 391 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ZMYM6O95789 1325 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CCDC93Q567U6 631 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CASC4Q6P4E1 433 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 USP6P35125 1406 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CIAO1O76071 339 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 XRCC6P12956 609 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRAF3-208ENST00000560371 OSBPP22059 807 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 GOLGA5Q8TBA6 731 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 AMNQ9BXJ7 453 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 NUCKS1Q9H1E3 243 aaKnown RBP14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CAPN9O14815 690 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ATP5DP30049 168 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 CFAP57Q96MR6 1250 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 ABCA8O94911 1581 aa14.88□□□□□ -0.03
TRAF3-208ENST00000560371 GMNNO75496 209 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 ADD3Q9UEY8 706 aaKnown RBP14.87□□□□□ -0.03
TRAF3-208ENST00000560371 STAT1P42224 750 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 ABI1Q8IZP0 508 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 TAB2Q9NYJ8 693 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 ABT1Q9ULW3 272 aaKnown RBP14.87□□□□□ -0.03
TRAF3-208ENST00000560371 DTNBO60941 627 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 IGBP1P78318 339 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 RPS6KC1Q96S38 1066 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 CLSTN2Q9H4D0 955 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 ERBB3P21860 1342 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 TNNC2P02585 160 aa14.87□□□□□ -0.03
TRAF3-208ENST00000560371 OR52Z1P0C646 297 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms