RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 COL4A1P02462 1669 aa12.53□□□□□ -0.4
PDE8A-212ENST00000560333 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
PDE8A-212ENST00000560333 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.41
PDE8A-212ENST00000560333 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
PDE8A-212ENST00000560333 CRHR2Q13324 411 aa12.52□□□□□ -0.41
PDE8A-212ENST00000560333 MCM6Q14566 821 aa12.52□□□□□ -0.41
PDE8A-212ENST00000560333 SLC10A5Q5PT55 438 aa12.52□□□□□ -0.41
PDE8A-212ENST00000560333 NYXQ9GZU5 481 aa12.52□□□□□ -0.41
PDE8A-212ENST00000560333 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
PDE8A-212ENST00000560333 C2CD2LO14523 706 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 MSTNO14793 375 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 SNRPNP63162 240 aaKnown RBP12.51□□□□□ -0.41
PDE8A-212ENST00000560333 CTBSQ01459 385 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 SP3Q02447 781 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 NUCB1Q02818 461 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 C1orf229Q6ZS94 237 aaPredicted RBP12.51□□□□□ -0.41
PDE8A-212ENST00000560333 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 UTP14AQ9BVJ6 771 aaKnown RBP12.51□□□□□ -0.41
PDE8A-212ENST00000560333 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 HDAC5Q9UQL6 1122 aa12.51□□□□□ -0.41
PDE8A-212ENST00000560333 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
PDE8A-212ENST00000560333 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 RPS12P25398 132 aaKnown RBP12.5□□□□□ -0.41
PDE8A-212ENST00000560333 PTPN12Q05209 780 aaKnown RBP12.5□□□□□ -0.41
PDE8A-212ENST00000560333 ZCCHC2Q9C0B9 1178 aaKnown RBP12.5□□□□□ -0.41
PDE8A-212ENST00000560333 COPRSQ9NQ92 184 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 MKL2Q9ULH7 1088 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 PCDHGC4Q9Y5F7 938 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
PDE8A-212ENST00000560333 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 DUOX1Q9NRD9 1551 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 TTC28Q96AY4 2481 aa12.5□□□□□ -0.41
PDE8A-212ENST00000560333 RTL9Q8NET4 1388 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 IRS2Q9Y4H2 1338 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 PDE8AO60658 829 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 HMMRO75330 724 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 MTFR1Q15390 333 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 NLRP8Q86W28 1048 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
PDE8A-212ENST00000560333 PA2G4Q9UQ80 394 aaKnown RBP12.49□□□□□ -0.41
PDE8A-212ENST00000560333 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 EYSQ5T1H1 3165 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 MANSC4A6NHS7 340 aaPredicted RBP12.48□□□□□ -0.41
PDE8A-212ENST00000560333 CDK2AP1O14519 115 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
PDE8A-212ENST00000560333 KLHDC4Q8TBB5 520 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
PDE8A-212ENST00000560333 SALL3Q9BXA9 1300 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 SASH1O94885 1247 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 ATP4AP20648 1035 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 NF2P35240 595 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 CTSWP56202 376 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
PDE8A-212ENST00000560333 ARSJQ5FYB0 599 aaPredicted RBP12.47□□□□□ -0.41
PDE8A-212ENST00000560333 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 FZD1Q9UP38 647 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 MUC3AQ02505 3323 aa12.47□□□□□ -0.41
PDE8A-212ENST00000560333 ZSWIM8A7E2V4 1837 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 A6NJY4 79 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.41
PDE8A-212ENST00000560333 ECE2O60344 883 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
PDE8A-212ENST00000560333 AMPD1P23109 780 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 SLCO4C1Q6ZQN7 724 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 ATG9AQ7Z3C6 839 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 SNX27Q96L92 541 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 GREM2Q9H772 168 aa12.46□□□□□ -0.41
PDE8A-212ENST00000560333 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.41
PDE8A-212ENST00000560333 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 ATXN7O15265 892 aaPredicted RBP12.45□□□□□ -0.42
PDE8A-212ENST00000560333 RAB11FIP3O75154 756 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 FARP2O94887 1054 aaPredicted RBP12.45□□□□□ -0.42
PDE8A-212ENST00000560333 EML3Q32P44 896 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 ARMC9Q7Z3E5 817 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
PDE8A-212ENST00000560333 SPOCK3Q9BQ16 436 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 PCDHGA11Q9Y5H2 935 aa12.45□□□□□ -0.42
PDE8A-212ENST00000560333 A0A1W2PNR3 127 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 LZTS3O60299 673 aaPredicted RBP12.44□□□□□ -0.42
PDE8A-212ENST00000560333 SKIP12755 728 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 UBE2Q1Q7Z7E8 422 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 SP8Q8IXZ3 490 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 OTUD7AQ8TE49 926 aaPredicted RBP12.44□□□□□ -0.42
PDE8A-212ENST00000560333 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
PDE8A-212ENST00000560333 LNPKQ9C0E8 428 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 SEC31BQ9NQW1 1179 aa12.44□□□□□ -0.42
PDE8A-212ENST00000560333 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
PDE8A-212ENST00000560333 ANGEL1Q9UNK9 670 aaKnown RBP12.44□□□□□ -0.42
PDE8A-212ENST00000560333 BACH1O14867 736 aa12.43□□□□□ -0.42
PDE8A-212ENST00000560333 ITGB2P05107 769 aa12.43□□□□□ -0.42
PDE8A-212ENST00000560333 ARAFP10398 606 aa12.43□□□□□ -0.42
PDE8A-212ENST00000560333 INHBEP58166 350 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms