RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TMEM57Q8N5G2 664 aa20.16■□□□□ 0.82
HERC1-207ENST00000560316 MMP19Q99542 508 aa20.16■□□□□ 0.82
HERC1-207ENST00000560316 TINF2Q9BSI4 451 aa20.16■□□□□ 0.82
HERC1-207ENST00000560316 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
HERC1-207ENST00000560316 ZNFX1Q9P2E3 1918 aaKnown RBP20.15■□□□□ 0.82
HERC1-207ENST00000560316 CYP2D6P10635 497 aa20.15■□□□□ 0.82
HERC1-207ENST00000560316 TMEM179Q6ZVK1 233 aa20.15■□□□□ 0.82
HERC1-207ENST00000560316 SIAH1Q8IUQ4 282 aa20.15■□□□□ 0.82
HERC1-207ENST00000560316 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.15■□□□□ 0.82
HERC1-207ENST00000560316 NAV1Q8NEY1 1877 aa20.15■□□□□ 0.82
HERC1-207ENST00000560316 ZNF865P0CJ78 1059 aaPredicted RBP20.14■□□□□ 0.81
HERC1-207ENST00000560316 PBX2P40425 430 aa20.14■□□□□ 0.81
HERC1-207ENST00000560316 ANKRD33Q7Z3H0 272 aa20.14■□□□□ 0.81
HERC1-207ENST00000560316 STARD7Q9NQZ5 370 aa20.14■□□□□ 0.81
HERC1-207ENST00000560316 NOP58Q9Y2X3 529 aaKnown RBP20.14■□□□□ 0.81
HERC1-207ENST00000560316 GRXCR1A8MXD5 290 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 DCDC2CA8MYV0 355 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 ADAMTS4O75173 837 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 SLC25A27O95847 323 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 AKR1A1P14550 325 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 AKR1B1P15121 316 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 ZNF792Q3KQV3 632 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 SDR42E1Q8WUS8 393 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 DYNLL2Q96FJ2 89 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 TOX2Q96NM4 488 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 GAS2L1Q99501 681 aaPredicted RBP20.13■□□□□ 0.81
HERC1-207ENST00000560316 CRNKL1Q9BZJ0 848 aaKnown RBP20.13■□□□□ 0.81
HERC1-207ENST00000560316 VCPKMTQ9H867 229 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
HERC1-207ENST00000560316 ROBO3Q96MS0 1386 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 TIMP1P01033 207 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 ACLYP53396 1101 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 ICA1Q05084 483 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
HERC1-207ENST00000560316 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
HERC1-207ENST00000560316 PBX4Q9BYU1 374 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 PRDM12Q9H4Q4 367 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 FBXO28Q9NVF7 368 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 TMX2Q9Y320 296 aa20.12■□□□□ 0.81
HERC1-207ENST00000560316 SYNRGQ9UMZ2 1314 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 WDR46O15213 610 aaKnown RBP20.11■□□□□ 0.81
HERC1-207ENST00000560316 PDE6AP16499 860 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 KCTD2Q14681 263 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 C16orf59Q7L2K0 433 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 RIOX2Q8IUF8 465 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 ATXN2LQ8WWM7 1075 aaKnown RBP20.11■□□□□ 0.81
HERC1-207ENST00000560316 DCP1AQ9NPI6 582 aaPredicted RBP20.11■□□□□ 0.81
HERC1-207ENST00000560316 TBX21Q9UL17 535 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
HERC1-207ENST00000560316 DIS3Q9Y2L1 958 aaKnown RBP20.11■□□□□ 0.81
HERC1-207ENST00000560316 COL11A1P12107 1806 aaPredicted RBP20.11■□□□□ 0.81
HERC1-207ENST00000560316 PLXNA1Q9UIW2 1896 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 CCDC85BQ15834 202 aaPredicted RBP20.1■□□□□ 0.81
HERC1-207ENST00000560316 KCNA10Q16322 511 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 TMEM240Q5SV17 173 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 SLC9C2Q5TAH2 1124 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 MFSD5Q6N075 450 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 LCORLQ8N3X6 602 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 ADAMTS19Q8TE59 1207 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 ASB2Q96Q27 587 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 THEGQ9P2T0 379 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 CNPY2Q9Y2B0 182 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 PARP14Q460N5 1801 aa20.1■□□□□ 0.81
HERC1-207ENST00000560316 ZNF532Q9HCE3 1301 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 MYADML2A6NDP7 307 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 SMIM22K7EJ46 135 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 STAT3P40763 770 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 IRX5P78411 483 aaPredicted RBP20.09■□□□□ 0.81
HERC1-207ENST00000560316 AKNAD1Q5T1N1 836 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 AACSQ86V21 672 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 KLHDC9Q8NEP7 349 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 SWAP70Q9UH65 585 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 MYO9BQ13459 2157 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
HERC1-207ENST00000560316 VWA5AO00534 786 aa20.08■□□□□ 0.81
HERC1-207ENST00000560316 ACRP10323 421 aa20.08■□□□□ 0.81
HERC1-207ENST00000560316 CSF2RAP15509 400 aa20.08■□□□□ 0.81
HERC1-207ENST00000560316 PPIGQ13427 754 aaKnown RBP eCLIP20.08■□□□□ 0.81
HERC1-207ENST00000560316 ADGRE1Q14246 886 aa20.08■□□□□ 0.81
HERC1-207ENST00000560316 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
HERC1-207ENST00000560316 MOXD2PA6NHM9 499 aa20.07■□□□□ 0.8
HERC1-207ENST00000560316 SNAI1O95863 264 aaPredicted RBP20.07■□□□□ 0.8
HERC1-207ENST00000560316 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
HERC1-207ENST00000560316 RASIP1Q5U651 963 aa20.07■□□□□ 0.8
HERC1-207ENST00000560316 REPS2Q8NFH8 660 aa20.07■□□□□ 0.8
HERC1-207ENST00000560316 UHRF1Q96T88 793 aaPredicted RBP20.07■□□□□ 0.8
HERC1-207ENST00000560316 ZHX1Q9UKY1 873 aaPredicted RBP20.07■□□□□ 0.8
HERC1-207ENST00000560316 ZNF214Q9UL59 606 aaPredicted RBP20.07■□□□□ 0.8
HERC1-207ENST00000560316 FAM184BQ9ULE4 1060 aa20.07■□□□□ 0.8
HERC1-207ENST00000560316 PPP1R9AQ9ULJ8 1098 aa20.07■□□□□ 0.8
HERC1-207ENST00000560316 CYP2D7A0A087X1C5 515 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 TCRBV5S4A2TA0A5A2 114 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 PRKAB2O43741 272 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 RAD21O60216 631 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 IGFBP4P22692 258 aa20.06■□□□□ 0.8
HERC1-207ENST00000560316 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
HERC1-207ENST00000560316 TTF1Q15361 905 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms