RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 IL25Q9H293 177 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
RABGGTA-216ENST00000560243 UBXN2AP68543 259 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 CCNA1P78396 465 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 CCL14Q16627 93 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 MKL1Q969V6 931 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 CHMP4CQ96CF2 233 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 NUDT12Q9BQG2 462 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 IL17RBQ9NRM6 502 aa13.83□□□□□ -0.2
RABGGTA-216ENST00000560243 CEP290O15078 2479 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 ORC4O43929 436 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 RANBP6O60518 1105 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 TTLL1O95922 423 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 FGRP09769 529 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 PTPREP23469 700 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 PLS1Q14651 629 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 SPATC1LQ9H0A9 340 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 CWC22Q9HCG8 908 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 PPP1R9AQ9ULJ8 1098 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 ADAMTS5Q9UNA0 930 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 ZMYM6O95789 1325 aa13.82□□□□□ -0.2
RABGGTA-216ENST00000560243 TSPY2A6NKD2 308 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 VWA5AO00534 786 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 HMGCRP04035 888 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 GJB1P08034 283 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 ERCC3P19447 782 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 MAP2K5Q13163 448 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 RASGRP2Q7LDG7 609 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 MB21D1Q8N884 522 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 TOMM22Q9NS69 142 aa13.81□□□□□ -0.2
RABGGTA-216ENST00000560243 LAMA4Q16363 1823 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 SLC15A5A6NIM6 579 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 HIP1O00291 1037 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 RGS2P41220 211 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 GJA8P48165 433 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 GRB14Q14449 540 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 REPS2Q8NFH8 660 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 U2AF1L4Q8WU68 220 aaKnown RBP13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 DEFB118Q96PH6 123 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 PAK6Q9NQU5 681 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
RABGGTA-216ENST00000560243 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 AKNAD1Q5T1N1 836 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 MAP3K21Q5TCX8 1036 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 NCAPG2Q86XI2 1143 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 NPLOC4Q8TAT6 608 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 APBA2Q99767 749 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 ZNF214Q9UL59 606 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 ZNFX1Q9P2E3 1918 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 NEDD4P46934 1319 aa13.79□□□□□ -0.2
RABGGTA-216ENST00000560243 COBLO75128 1261 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 SGPL1O95470 568 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 MCCP23508 829 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 CHMLP26374 656 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 ADORA2AP29274 412 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 NOVP48745 357 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 CACNB2Q08289 660 aaPredicted RBP13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 STAG1Q8WVM7 1258 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 KIFC2Q96AC6 838 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 SYNPO2Q9UMS6 1093 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 MTMR7Q9Y216 660 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 ZNF236Q9UL36 1845 aa13.78□□□□□ -0.2
RABGGTA-216ENST00000560243 ZNF213O14771 459 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 HOXC6P09630 235 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 BMP3P12645 472 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 STAT3P40763 770 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 UBE2Q1Q7Z7E8 422 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 RIOX2Q8IUF8 465 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 RPTORQ8N122 1335 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 GMCL1Q96IK5 515 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 DSCC1Q9BVC3 393 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 MROH8Q9H579 483 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
RABGGTA-216ENST00000560243 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 STRNO43815 780 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 IGHA2P01877 340 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 CYP2C19P33261 490 aa13.76□□□□□ -0.21
RABGGTA-216ENST00000560243 PTH1RQ03431 593 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms