RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 ZNF865P0CJ78 1059 aaPredicted RBP23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 DNAJB2P25686 324 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 FPGSQ05932 587 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 ZNF792Q3KQV3 632 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 TJAP1Q5JTD0 557 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 SPICE1Q8N0Z3 855 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 SLC44A5Q8NCS7 719 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 CRNKL1Q9BZJ0 848 aaKnown RBP23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 VCPKMTQ9H867 229 aa23.97■■□□□ 1.43
RABGGTA-214ENST00000560163 COL11A1P12107 1806 aaPredicted RBP23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 PQBP1O60828 265 aaKnown RBP23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 ADAMTS4O75173 837 aa23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 PGK2P07205 417 aa23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 CYP2D6P10635 497 aa23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 CLEC10AQ8IUN9 316 aa23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 TMEM39AQ9NV64 488 aa23.96■■□□□ 1.43
RABGGTA-214ENST00000560163 PDE6AP16499 860 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 SLC9C2Q5TAH2 1124 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 RIOX2Q8IUF8 465 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 SDR42E1Q8WUS8 393 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 TSEN34Q9BSV6 310 aaKnown RBP23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 ZNF576Q9H609 170 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 SWAP70Q9UH65 585 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 PLXNA1Q9UIW2 1896 aa23.95■■□□□ 1.42
RABGGTA-214ENST00000560163 TCRBV5S4A2TA0A5A2 114 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 TNFRSF10AO00220 468 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 WDR46O15213 610 aaKnown RBP23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 ZKSCAN2Q63HK3 967 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 DYNLL2Q96FJ2 89 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 MMP19Q99542 508 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 ARHGEF10LQ9HCE6 1279 aa23.94■■□□□ 1.42
RABGGTA-214ENST00000560163 AKR1A1P14550 325 aa23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 AKR1B1P15121 316 aa23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 ICA1Q05084 483 aa23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 TTF1Q15361 905 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 CCSAPQ6IQ19 270 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 LENG1Q96BZ8 264 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-214ENST00000560163 ZNF532Q9HCE3 1301 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 TIMP1P01033 207 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 COL9A1P20849 921 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 ACLYP53396 1101 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 C16orf59Q7L2K0 433 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 AACSQ86V21 672 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 LCORLQ8N3X6 602 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 KLHDC9Q8NEP7 349 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.92■■□□□ 1.428e-7■□□□□ 10.4
RABGGTA-214ENST00000560163 SH2D4AQ9H788 454 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 FBXO28Q9NVF7 368 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 TBX21Q9UL17 535 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 ZNF214Q9UL59 606 aaPredicted RBP23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 CHD7Q9P2D1 2997 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 REV3LO60673 3130 aa23.92■■□□□ 1.42
RABGGTA-214ENST00000560163 MYH8P13535 1937 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 DCDC2CA8MYV0 355 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 VWA5AO00534 786 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 STAT3P40763 770 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 KCTD2Q14681 263 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 RASIP1Q5U651 963 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 REPS2Q8NFH8 660 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 TIFAQ96CG3 184 aa23.91■■□□□ 1.42
RABGGTA-214ENST00000560163 SMIM22K7EJ46 135 aa23.9■■□□□ 1.42
RABGGTA-214ENST00000560163 SAMD1Q6SPF0 538 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-214ENST00000560163 CCDC17Q96LX7 622 aa23.9■■□□□ 1.42
RABGGTA-214ENST00000560163 STARD7Q9NQZ5 370 aa23.9■■□□□ 1.42
RABGGTA-214ENST00000560163 XIRP2A4UGR9 3374 aa23.9■■□□□ 1.42
RABGGTA-214ENST00000560163 SYNRGQ9UMZ2 1314 aa23.89■■□□□ 1.42
RABGGTA-214ENST00000560163 MOXD2PA6NHM9 499 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 CDK7P50613 346 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 MFSD5Q6N075 450 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 CEP85Q6P2H3 762 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 NUP133Q8WUM0 1156 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 EXOC6BQ9Y2D4 811 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 BDP1A6H8Y1 2624 aa23.89■■□□□ 1.41
RABGGTA-214ENST00000560163 SNAI1O95863 264 aaPredicted RBP23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 EEF2P13639 858 aaKnown RBP23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 CDK8P49336 464 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 KCNA10Q16322 511 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 TMEM240Q5SV17 173 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 ERC1Q8IUD2 1116 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 MSL3Q8N5Y2 521 aaKnown RBP23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 PPP1R9AQ9ULJ8 1098 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 CNPY2Q9Y2B0 182 aa23.88■■□□□ 1.41
RABGGTA-214ENST00000560163 PRKAB2O43741 272 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 RLBP1P12271 317 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 PBX2P40425 430 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 AKNAD1Q5T1N1 836 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 C12orf60Q5U649 245 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 MAMDC4Q6UXC1 1216 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 ATXN2LQ8WWM7 1075 aaKnown RBP23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 PBX4Q9BYU1 374 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 ARMT1Q9H993 441 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 ATP8A2Q9NTI2 1148 aa23.87■■□□□ 1.41
RABGGTA-214ENST00000560163 ELP1O95163 1332 aa23.86■■□□□ 1.41
RABGGTA-214ENST00000560163 GRXCR1A8MXD5 290 aa23.86■■□□□ 1.41
RABGGTA-214ENST00000560163 COPB2P35606 906 aa23.86■■□□□ 1.41
RABGGTA-214ENST00000560163 FAM184BQ9ULE4 1060 aa23.86■■□□□ 1.41
RABGGTA-214ENST00000560163 BAZ2AQ9UIF9 1905 aaKnown RBP23.86■■□□□ 1.41
RABGGTA-214ENST00000560163 SYNGAP1Q96PV0 1343 aa23.85■■□□□ 1.41
RABGGTA-214ENST00000560163 DNAJC25-GNG10A0A024R161 153 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms