RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PDE4BQ07343 736 aa21.41■■□□□ 1.02
SEMA4B-215ENST00000560089 NNTQ13423 1086 aa21.41■■□□□ 1.02
SEMA4B-215ENST00000560089 B4GALNT2Q8NHY0 566 aa21.41■■□□□ 1.02
SEMA4B-215ENST00000560089 ECHDC1Q9NTX5 307 aa21.41■■□□□ 1.02
SEMA4B-215ENST00000560089 E7EVH7 732 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 HIP1O00291 1037 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 CMA1P23946 247 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 PAPOLAP51003 745 aaKnown RBP21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 XRCC4Q13426 336 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 FAM98CQ17RN3 349 aaKnown RBP21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 PIGBQ92521 554 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 LRRC2Q9BYS8 371 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 OSBPL7Q9BZF2 842 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 USP44Q9H0E7 712 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 CTDNEP1O95476 244 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 FAM163BP0C2L3 166 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 CKAP4Q07065 602 aaKnown RBP21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 POLA2Q14181 598 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 KRT32Q14532 448 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 MAP3K2Q9Y2U5 619 aa21.4■■□□□ 1.02
SEMA4B-215ENST00000560089 SRGAP2O75044 1071 aa21.39■■□□□ 1.02
SEMA4B-215ENST00000560089 KIF4AO95239 1232 aa21.39■■□□□ 1.02
SEMA4B-215ENST00000560089 SETSIPP0DME0 302 aa21.39■■□□□ 1.02
SEMA4B-215ENST00000560089 MSL1Q68DK7 614 aa21.39■■□□□ 1.02
SEMA4B-215ENST00000560089 CAGE1Q8TC20 777 aa21.39■■□□□ 1.02
SEMA4B-215ENST00000560089 SCTRP47872 440 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 HHATQ5VTY9 493 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 ALS2CLQ60I27 953 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 GPATCH3Q96I76 525 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 SAR1BQ9Y6B6 198 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 DISP2A7MBM2 1401 aa21.39■■□□□ 1.01
SEMA4B-215ENST00000560089 A0A0D9SFI3 127 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 ATP2C2O75185 946 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 POLR3DP05423 398 aaPredicted RBP21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 NBPF7P0C2Y1 421 aaPredicted RBP21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 PYGBP11216 843 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 NR1I3Q14994 352 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 CCDC70Q6NSX1 233 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 SPATA21Q7Z572 469 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 CYFIP2Q96F07 1278 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 MRC1P22897 1456 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 JCADQ9P266 1359 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 ANP32DO95626 131 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 ZNF18P17022 549 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 CDC27P30260 824 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 DDB1Q16531 1140 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 POLR3EQ9NVU0 708 aa21.38■■□□□ 1.01
SEMA4B-215ENST00000560089 SLMAPQ14BN4 828 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 PAPOLBQ9NRJ5 636 aaKnown RBP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 RGL1Q9NZL6 768 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 ELF3P78545 371 aaPredicted RBP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 APBA1Q02410 837 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 XAGE3Q8WTP9 111 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 TOGARAM1Q9Y4F4 1720 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 SPDYE3A6NKU9 549 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 CDKL5O76039 1030 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 MAGEA8P43361 318 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 LONRF3Q496Y0 759 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 CLASRPQ8N2M8 674 aaKnown RBP21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 TSGA10Q9BZW7 698 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 GUCA1BQ9UMX6 200 aa21.37■■□□□ 1.01
SEMA4B-215ENST00000560089 SPATA31A5Q5VU36 1347 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 SPATA31A7Q8IWB4 1347 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 MFAP3LO75121 409 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 ROR2Q01974 943 aaKnown RBP21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 TSEN2Q8NCE0 465 aaKnown RBP21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 EP400Q96L91 3159 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 TEX33O43247 280 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 LINGO3P0C6S8 592 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 FERP16591 822 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 PDIA5Q14554 519 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 EHBP1Q8NDI1 1231 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 TSC22D3Q99576 134 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 EPAS1Q99814 870 aa21.36■■□□□ 1.01
SEMA4B-215ENST00000560089 ATP1A1P05023 1023 aaKnown RBP21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 NR1D1P20393 614 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 MDH1P40925 334 aaKnown RBP21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 GNPTABQ3T906 1256 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 HSP90AB4PQ58FF6 505 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 NCAPG2Q86XI2 1143 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 ZNF570Q96NI8 536 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 ALS2CR12Q96Q35 445 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 GNAT1P11488 350 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 USP4Q13107 963 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 PPANQ9NQ55 473 aaKnown RBP21.35■■□□□ 1.01
SEMA4B-215ENST00000560089 ECEL1O95672 775 aa21.34■■□□□ 1.01
SEMA4B-215ENST00000560089 KRT14P02533 472 aa21.34■■□□□ 1.01
SEMA4B-215ENST00000560089 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
SEMA4B-215ENST00000560089 HIBCHQ6NVY1 386 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms