RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 CCAR1Q8IX12 1150 aaKnown RBP16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 COA7Q96BR5 231 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
CHRNB4-204ENST00000559849 B4E1Z4 1266 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 TOP1P11387 765 aaKnown RBP16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 CCNA1P78396 465 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 CNMDO75829 334 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 GMCL1Q96IK5 515 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 FBXO28Q9NVF7 368 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 ADAMTS5Q9UNA0 930 aa16.1■□□□□ 0.17
CHRNB4-204ENST00000559849 BMP3P12645 472 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 MAPK4P31152 587 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 SLC1A4P43007 532 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 ATG4CQ96DT6 458 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 PARP14Q460N5 1801 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 MCCP23508 829 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 PRKCZQ05513 592 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 RAET1EQ8TD07 263 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 ZKSCAN3Q9BRR0 538 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
CHRNB4-204ENST00000559849 E7EWF7 191 aa16.08■□□□□ 0.16
CHRNB4-204ENST00000559849 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
CHRNB4-204ENST00000559849 PORCNQ9H237 461 aa16.08■□□□□ 0.16
CHRNB4-204ENST00000559849 VWA5AO00534 786 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 FLT3LGP49771 235 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 NECTIN1Q15223 517 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 CHURC1Q8WUH1 139 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 SPATC1LQ9H0A9 340 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 GABRQQ9UN88 632 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 CCDC85CA6NKD9 419 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 STAT2P52630 851 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 RALYLQ86SE5 291 aaKnown RBP16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 ANKS1AQ92625 1134 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 CWC22Q9HCG8 908 aaKnown RBP16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 GJD2Q9UKL4 321 aa16.07■□□□□ 0.16
CHRNB4-204ENST00000559849 IRF5Q13568 498 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 PLS1Q14651 629 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 TMEM132BQ14DG7 1078 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 GPR142Q7Z601 462 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 DCAF4Q8WV16 495 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 ISY1Q9ULR0 285 aaKnown RBP16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 MTMR7Q9Y216 660 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 TAF6LQ9Y6J9 622 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 PLA2G6O60733 806 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 FDX1P10109 184 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 FAM160B2Q86V87 743 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 ENAHQ8N8S7 591 aaPredicted RBP16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 KIFC2Q96AC6 838 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
CHRNB4-204ENST00000559849 TNKSO95271 1327 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 SLC27A2O14975 620 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 ZBED4O75132 1171 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 GRK4P32298 578 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 STAT3P40763 770 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 IKQ13123 557 aaPredicted RBP16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 CREB3L3Q68CJ9 461 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 KCTD1Q719H9 257 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 SHCBP1Q8NEM2 672 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 KAT14Q9H8E8 782 aa16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
CHRNB4-204ENST00000559849 SLC25A27O95847 323 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 PXYLP1Q8TE99 480 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 ARMC5Q96C12 935 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 MROH8Q9H579 483 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 ZNF214Q9UL59 606 aaPredicted RBP16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
CHRNB4-204ENST00000559849 STRNO43815 780 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms