RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 TIMP1P01033 207 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 AKR1A1P14550 325 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
TRAF3-207ENST00000559734 MAP3K12Q12852 859 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 TINF2Q9BSI4 451 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 MCM9Q9NXL9 1143 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 NRBP1Q9UHY1 535 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 DBNLQ9UJU6 430 aaKnown RBP13.1□□□□□ -0.31
TRAF3-207ENST00000559734 TNNQ9UQP3 1299 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
TRAF3-207ENST00000559734 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 IGSF3O75054 1194 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ACRP10323 421 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ACLYP53396 1101 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
TRAF3-207ENST00000559734 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAF3-207ENST00000559734 KCTD2Q14681 263 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 TMEM132BQ14DG7 1078 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 MICALL1Q8N3F8 863 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-207ENST00000559734 CLUAP1Q96AJ1 413 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
TRAF3-207ENST00000559734 PPP1R12CQ9BZL4 782 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 CNPY2Q9Y2B0 182 aa13.09□□□□□ -0.31
TRAF3-207ENST00000559734 RAD21O60216 631 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 ADAMTS4O75173 837 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 BCAR3O75815 825 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 SLC25A27O95847 323 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-207ENST00000559734 CSF2RAP15509 400 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 ICA1Q05084 483 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 MFSD5Q6N075 450 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 TMEM179Q6ZVK1 233 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 TOX2Q96NM4 488 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 NECAB3Q96P71 396 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-207ENST00000559734 MSRAQ9UJ68 235 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
TRAF3-207ENST00000559734 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
TRAF3-207ENST00000559734 MYADML2A6NDP7 307 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 CYP2D6P10635 497 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 TRIM27P14373 513 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 GABPAQ06546 454 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 KCNA10Q16322 511 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 TMEM199Q8N511 208 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 SDR42E1Q8WUS8 393 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 RIOK1Q9BRS2 568 aaKnown RBP13.07□□□□□ -0.32
TRAF3-207ENST00000559734 TSEN34Q9BSV6 310 aaKnown RBP13.07□□□□□ -0.32
TRAF3-207ENST00000559734 CRNKL1Q9BZJ0 848 aaKnown RBP13.07□□□□□ -0.32
TRAF3-207ENST00000559734 NKX2-4Q9H2Z4 354 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 FBXO28Q9NVF7 368 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
TRAF3-207ENST00000559734 MOXD2PA6NHM9 499 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 WDR46O15213 610 aaKnown RBP13.06□□□□□ -0.32
TRAF3-207ENST00000559734 AKR1B1P15121 316 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 POLA2Q14181 598 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 RAB30Q15771 203 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 PSRC1Q6PGN9 363 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-207ENST00000559734 ZNF365Q70YC5 407 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 RIOX2Q8IUF8 465 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 TRMT2AQ8IZ69 625 aaKnown RBP13.06□□□□□ -0.32
TRAF3-207ENST00000559734 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-207ENST00000559734 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-207ENST00000559734 FAM184BQ9ULE4 1060 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 MROH7Q68CQ1 1323 aa13.06□□□□□ -0.32
TRAF3-207ENST00000559734 IPO8O15397 1037 aaKnown RBP13.05□□□□□ -0.32
TRAF3-207ENST00000559734 C6orf222P0C671 652 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-207ENST00000559734 STAT3P40763 770 aa13.05□□□□□ -0.32
TRAF3-207ENST00000559734 IRX5P78411 483 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-207ENST00000559734 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
TRAF3-207ENST00000559734 SLC28A3Q9HAS3 691 aa13.05□□□□□ -0.32
TRAF3-207ENST00000559734 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
TRAF3-207ENST00000559734 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
TRAF3-207ENST00000559734 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
TRAF3-207ENST00000559734 PLXNA1Q9UIW2 1896 aa13.04□□□□□ -0.32
TRAF3-207ENST00000559734 TLR3O15455 904 aaKnown RBP13.04□□□□□ -0.32
TRAF3-207ENST00000559734 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
TRAF3-207ENST00000559734 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
TRAF3-207ENST00000559734 MTIF3Q9H2K0 278 aaKnown RBP13.04□□□□□ -0.32
TRAF3-207ENST00000559734 SPC25Q9HBM1 224 aa13.04□□□□□ -0.32
TRAF3-207ENST00000559734 SMCHD1A6NHR9 2005 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms