RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KCNC2Q96PR1 638 aa5.49□□□□□ -1.53
CASC4-210ENST00000559550 KIF2CQ99661 725 aa5.49□□□□□ -1.53
CASC4-210ENST00000559550 DCP1AQ9NPI6 582 aaPredicted RBP5.49□□□□□ -1.53
CASC4-210ENST00000559550 ZNRF3Q9ULT6 936 aa5.49□□□□□ -1.53
CASC4-210ENST00000559550 CEP131Q9UPN4 1083 aa5.49□□□□□ -1.53
CASC4-210ENST00000559550 UBOX5O94941 541 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 CBX7O95931 251 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 SRFP11831 508 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 SYN1P17600 705 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 SOX9P48436 509 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 CLCN7P51798 805 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 SFRP5Q5T4F7 317 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 CCDC81Q6ZN84 652 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 PHACTR4Q8IZ21 702 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 IRF2BPLQ9H1B7 796 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 SEMA3GQ9NS98 782 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 INPP5FQ9Y2H2 1132 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 CAPN6Q9Y6Q1 641 aa5.48□□□□□ -1.53
CASC4-210ENST00000559550 MEIS3P2A8K0S8 358 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 GNAT3A8MTJ3 354 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 RGS13O14921 159 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 RAG1P15918 1043 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 MLECQ14165 292 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 CDCP2Q5VXM1 449 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 FBXW10Q5XX13 1052 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 C22orf34Q6ZV56 151 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 NLRC3Q7RTR2 1065 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 MFSD4AQ8N468 514 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 CCDC74BQ96LY2 380 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 Q96M66 194 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 FERD3LQ96RJ6 166 aa5.47□□□□□ -1.53
CASC4-210ENST00000559550 PSPNO60542 156 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 LRRN2O75325 713 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 NME1P15531 152 aaKnown RBP5.46□□□□□ -1.54
CASC4-210ENST00000559550 BMP7P18075 431 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 ETV3P41162 512 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 NASPP49321 788 aaPredicted RBP5.46□□□□□ -1.54
CASC4-210ENST00000559550 SKOR2Q2VWA4 1001 aaPredicted RBP5.46□□□□□ -1.54
CASC4-210ENST00000559550 ZNF746Q6NUN9 644 aaPredicted RBP5.46□□□□□ -1.54
CASC4-210ENST00000559550 RUFY4Q6ZNE9 571 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 KREMEN1Q96MU8 473 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 SLC9A7Q96T83 725 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 ZCCHC4Q9H5U6 513 aa5.46□□□□□ -1.54
CASC4-210ENST00000559550 FAM155AB1AL88 458 aaPredicted RBP5.45□□□□□ -1.54
CASC4-210ENST00000559550 ACRP10323 421 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 TNK2Q07912 1038 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 COL9A2Q14055 689 aaPredicted RBP5.45□□□□□ -1.54
CASC4-210ENST00000559550 LRRFIP1Q32MZ4 808 aaKnown RBP5.45□□□□□ -1.54
CASC4-210ENST00000559550 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 KCNN1Q92952 543 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 VWCEQ96DN2 955 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 SPATA32Q96LK8 384 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 HSPA12BQ96MM6 686 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 SLC26A8Q96RN1 970 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 CAPN10Q9HC96 672 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 ATP13A1Q9HD20 1204 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 RTEL1Q9NZ71 1219 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 ST14Q9Y5Y6 855 aa5.45□□□□□ -1.54
CASC4-210ENST00000559550 FAM86C2PA6NEL3 165 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 WASH4PA8MWX3 477 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 TNFRSF10CO14798 259 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 IMPDH2P12268 514 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 CYP7A1P22680 504 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 GBP1P32455 592 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 NFIXQ14938 502 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 ZYXQ15942 572 aaKnown RBP5.44□□□□□ -1.54
CASC4-210ENST00000559550 LSRQ86X29 649 aaPredicted RBP5.44□□□□□ -1.54
CASC4-210ENST00000559550 MARCH10Q8NA82 808 aaPredicted RBP5.44□□□□□ -1.54
CASC4-210ENST00000559550 RBBP8NLQ8NC74 664 aaPredicted RBP5.44□□□□□ -1.54
CASC4-210ENST00000559550 CXorf38Q8TB03 319 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 RNF141Q8WVD5 230 aa5.44□□□□□ -1.54
CASC4-210ENST00000559550 H3BS24 57 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 ATF4P18848 351 aaPredicted RBP5.43□□□□□ -1.54
CASC4-210ENST00000559550 KIR3DL1P43629 444 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 DTWD2Q8NBA8 298 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 ABHD4Q8TB40 342 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 SHDQ96IW2 340 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 SEC16BQ96JE7 1060 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 COX4I2Q96KJ9 171 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 ZNF512BQ96KM6 892 aaPredicted RBP5.43□□□□□ -1.54
CASC4-210ENST00000559550 SRRTQ9BXP5 876 aaKnown RBP5.43□□□□□ -1.54
CASC4-210ENST00000559550 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
CASC4-210ENST00000559550 GIPRP48546 466 aa5.42□□□□□ -1.54
CASC4-210ENST00000559550 EIF6P56537 245 aaKnown RBP5.42□□□□□ -1.54
CASC4-210ENST00000559550 NBPF12Q5TAG4 269 aaPredicted RBP5.42□□□□□ -1.54
CASC4-210ENST00000559550 FAM169BQ8N8A8 192 aa5.42□□□□□ -1.54
CASC4-210ENST00000559550 SLC6A18Q96N87 628 aa5.42□□□□□ -1.54
CASC4-210ENST00000559550 TM9SF2Q99805 663 aa5.42□□□□□ -1.54
CASC4-210ENST00000559550 ASPNQ9BXN1 380 aa5.42□□□□□ -1.54
CASC4-210ENST00000559550 DUSP15Q9H1R2 295 aaPredicted RBP5.42□□□□□ -1.54
CASC4-210ENST00000559550 ADAMTS20P59510 1910 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 TRIM13O60858 407 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 GUCY2CP25092 1073 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 CCNFP41002 786 aa5.41□□□□□ -1.54
CASC4-210ENST00000559550 SNW1Q13573 536 aaKnown RBP5.41□□□□□ -1.54
CASC4-210ENST00000559550 INTS3Q68E01 1043 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms