RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ASAP3Q8TDY4 903 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 UBASH3BQ8TF42 649 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 CRBNQ96SW2 442 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 PRDM4Q9UKN5 801 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 AFF2P51816 1311 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 ERVV-2B6SEH9 535 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 POLR3DP05423 398 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 DDB1Q16531 1140 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 GALNT12Q8IXK2 581 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 ARMC10Q8N2F6 343 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
ZEB1-216ENST00000559496 NOB1Q9ULX3 412 aaKnown RBP8.73□□□□□ -1.01
ZEB1-216ENST00000559496 HOXB7P09629 217 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 FSTP19883 344 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 NLRP12P59046 1061 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 CCDC30Q5VVM6 783 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 ZNF790Q6PG37 636 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 ATF7IPQ6VMQ6 1270 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
ZEB1-216ENST00000559496 TTC5Q8N0Z6 440 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 PANK1Q8TE04 598 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 FAM46AQ96IP4 442 aaKnown RBP8.72□□□□□ -1.01
ZEB1-216ENST00000559496 STK31Q9BXU1 1019 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 RNF208Q9H0X6 261 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
ZEB1-216ENST00000559496 STOML1Q9UBI4 398 aa8.72□□□□□ -1.01
ZEB1-216ENST00000559496 TOGARAM1Q9Y4F4 1720 aa8.71□□□□□ -1.01
ZEB1-216ENST00000559496 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 HYAL3O43820 417 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-216ENST00000559496 TRIM27P14373 513 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 ANKRD34AQ69YU3 496 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 FAM129BQ96TA1 746 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 CHMP4AQ9BY43 222 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 PDCL3Q9H2J4 239 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 TNNQ9UQP3 1299 aa8.71□□□□□ -1.02
ZEB1-216ENST00000559496 A0A1W2PP55 124 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 GSC2O15499 205 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 SART1O43290 800 aaKnown RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 RLBP1P12271 317 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 CCNJLQ8IV13 435 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 IPO4Q8TEX9 1081 aaKnown RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 UTP4Q969X6 686 aaKnown RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 RUSC1Q9BVN2 902 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 API5Q9BZZ5 524 aaKnown RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 TMOD3Q9NYL9 352 aa8.7□□□□□ -1.02
ZEB1-216ENST00000559496 TRPC5Q9UL62 973 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-216ENST00000559496 ATRNO75882 1429 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 HEG1Q9ULI3 1381 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 CACNA1FO60840 1977 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 KAT6BQ8WYB5 2073 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 ESRRAP11474 423 aaPredicted RBP8.69□□□□□ -1.02
ZEB1-216ENST00000559496 EIF2S2P20042 333 aaKnown RBP8.69□□□□□ -1.02
ZEB1-216ENST00000559496 KIAA0319Q5VV43 1072 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 ZNF496Q96IT1 587 aaPredicted RBP8.69□□□□□ -1.02
ZEB1-216ENST00000559496 MYRFLQ96LU7 910 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 LIN7BQ9HAP6 207 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 NAP1L2Q9ULW6 460 aaPredicted RBP8.69□□□□□ -1.02
ZEB1-216ENST00000559496 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
ZEB1-216ENST00000559496 PTPRCP08575 1304 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 ITGB4P16144 1822 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 A0A096LPE4 126 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 A0A1W2PPZ6 126 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 CPNE3O75131 537 aaKnown RBP8.68□□□□□ -1.02
ZEB1-216ENST00000559496 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
ZEB1-216ENST00000559496 MVPQ14764 893 aaKnown RBP8.68□□□□□ -1.02
ZEB1-216ENST00000559496 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 ITPRIPQ8IWB1 547 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-216ENST00000559496 TCF12Q99081 682 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 GLI3P10071 1580 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 DOT1LQ8TEK3 1739 aa8.68□□□□□ -1.02
ZEB1-216ENST00000559496 C5P01031 1676 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 THSD7AQ9UPZ6 1657 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 ABCC4O15439 1325 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 UBR2Q8IWV8 1755 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 PRAMEF22A3QJZ6 481 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 FDX2Q6P4F2 183 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 G2E3Q7L622 706 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 TMEM57Q8N5G2 664 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 PIGBQ92521 554 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 SYTL4Q96C24 671 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-216ENST00000559496 CHPF2Q9P2E5 772 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
ZEB1-216ENST00000559496 BCL9O00512 1426 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 RGS12O14924 1447 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 TPM2P07951 284 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 GSTM4Q03013 218 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 ORC1Q13415 861 aa8.66□□□□□ -1.02
ZEB1-216ENST00000559496 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-216ENST00000559496 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms