RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ZNF543Q08ER8 600 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 APOBRQ0VD83 1088 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 GRM4Q14833 912 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 TREML2Q5T2D2 321 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 SLFN13Q68D06 897 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 ANKRD23Q86SG2 305 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 MAD2L2Q9UI95 211 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 AGTPBP1Q9UPW5 1226 aa17.33■□□□□ 0.36
SNRPA1-207ENST00000559309 CCL15-CCL14A0A0B4J2E2 113 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 MAP2K2P36507 400 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 ATP2B2Q01814 1243 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 CCL15Q16663 113 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 LBX2Q6XYB7 198 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 CATSPERGQ6ZRH7 1159 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 REM2Q8IYK8 340 aaPredicted RBP17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 ADAMTS5Q9UNA0 930 aa17.32■□□□□ 0.36
SNRPA1-207ENST00000559309 MYPNQ86TC9 1320 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 KLF18A0A0U1RQI7 1052 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 CCDC69A6NI79 296 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 BTBD19C9JJ37 291 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 CALM1P0DP23 149 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 CALM2P0DP24 149 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 CALM3P0DP25 149 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 BMP3P12645 472 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 SMARCA1P28370 1054 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 KIF23Q02241 960 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 FUT2Q10981 343 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 GPATCH4Q5T3I0 446 aaKnown RBP17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 CATIPQ7Z7H3 387 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 SNX21Q969T3 373 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 FEZ1Q99689 392 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
SNRPA1-207ENST00000559309 ADGRA2Q96PE1 1338 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 PFKFB2O60825 505 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 ZYXQ15942 572 aaKnown RBP17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 NTRK3Q16288 839 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 SPICE1Q8N0Z3 855 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 FANCBQ8NB91 859 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 MTMR8Q96EF0 704 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 ZBTB43O43298 467 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 AOC2O75106 756 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 LARGE1O95461 756 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 CDC27P30260 824 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 SLC1A4P43007 532 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 ME3Q16798 604 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 FAM83BQ5T0W9 1011 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 ABHD8Q96I13 439 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 RPAP3Q9H6T3 665 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-207ENST00000559309 ST18O60284 1047 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 MCM2P49736 904 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 REPS2Q8NFH8 660 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 RIOX1Q9H6W3 641 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 COL11A1P12107 1806 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-207ENST00000559309 CYTH3O43739 400 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 DSG3P32926 999 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 TTBK2Q6IQ55 1244 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 GADL1Q6ZQY3 521 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 TMTC3Q6ZXV5 915 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 KCTD1Q719H9 257 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 NBPF11Q86T75 865 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 SPZ1Q9BXG8 430 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
SNRPA1-207ENST00000559309 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
SNRPA1-207ENST00000559309 PDHXO00330 501 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms