RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 SEPT4O43236 478 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 STRNO43815 780 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 AKR1B1P15121 316 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 ADCYAP1R1P41586 468 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 TTF1Q15361 905 aaPredicted RBP10.46□□□□□ -0.73
CLPX-205ENST00000559218 SHHQ15465 462 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 TRIM60Q495X7 471 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 SLC39A5Q6ZMH5 540 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 TMEM179Q6ZVK1 233 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 SH3RF1Q7Z6J0 888 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 NCAPG2Q86XI2 1143 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLPX-205ENST00000559218 SHCBP1Q8NEM2 672 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 ATG4CQ96DT6 458 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
CLPX-205ENST00000559218 COL25A1Q9BXS0 654 aaPredicted RBP10.46□□□□□ -0.73
CLPX-205ENST00000559218 PRDM5Q9NQX1 630 aaPredicted RBP10.46□□□□□ -0.73
CLPX-205ENST00000559218 PRKAG2Q9UGJ0 569 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 PCDHB13Q9Y5F0 798 aa10.46□□□□□ -0.73
CLPX-205ENST00000559218 FRMPD3Q5JV73 1810 aa10.46□□□□□ -0.74
CLPX-205ENST00000559218 CHD9Q3L8U1 2897 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 TRIM43BA6NCK2 446 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 FLOT1O75955 427 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 CHGBP05060 677 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 SNX17Q15036 470 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 LRRC41Q15345 812 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 FAM47AQ5JRC9 791 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 MB21D1Q8N884 522 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 BADQ92934 168 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 TRIM43Q96BQ3 446 aaPredicted RBP10.45□□□□□ -0.74
CLPX-205ENST00000559218 MAML3Q96JK9 1138 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 MROH8Q9H579 483 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 PDLIM7Q9NR12 457 aa10.45□□□□□ -0.74
CLPX-205ENST00000559218 MBD4O95243 580 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 PGK2P07205 417 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 TAL1P17542 331 aaPredicted RBP10.44□□□□□ -0.74
CLPX-205ENST00000559218 ITGB8P26012 769 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 HNRNPUQ00839 825 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLPX-205ENST00000559218 TLE2Q04725 743 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 ICA1Q05084 483 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 TMEM132BQ14DG7 1078 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 SIRT2Q8IXJ6 389 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 ABRAQ8N0Z2 381 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 CDX2Q99626 313 aaPredicted RBP10.44□□□□□ -0.74
CLPX-205ENST00000559218 VCPKMTQ9H867 229 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 BMP2KQ9NSY1 1161 aaPredicted RBP10.44□□□□□ -0.74
CLPX-205ENST00000559218 FBXO28Q9NVF7 368 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 SWAP70Q9UH65 585 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 TMX2Q9Y320 296 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 RLFQ13129 1914 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 NAV1Q8NEY1 1877 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 ZNF236Q9UL36 1845 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 A0A0G2JMZ2 1700 aa10.44□□□□□ -0.74
CLPX-205ENST00000559218 IFIT2P09913 472 aaKnown RBP10.43□□□□□ -0.74
CLPX-205ENST00000559218 FCER1AP12319 257 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 EEF2P13639 858 aaKnown RBP10.43□□□□□ -0.74
CLPX-205ENST00000559218 CDK8P49336 464 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 EPHB4P54760 987 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 C12orf60Q5U649 245 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
CLPX-205ENST00000559218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLPX-205ENST00000559218 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
CLPX-205ENST00000559218 TTYH1Q9H313 450 aaPredicted RBP10.43□□□□□ -0.74
CLPX-205ENST00000559218 SEMA6BQ9H3T3 888 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 ARHGEF10LQ9HCE6 1279 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 SLC5A4Q9NY91 659 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 ADAMTS5Q9UNA0 930 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 PHF24Q9UPV7 400 aa10.43□□□□□ -0.74
CLPX-205ENST00000559218 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 USP17L21D6R901 530 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 WDR46O15213 610 aaKnown RBP10.42□□□□□ -0.74
CLPX-205ENST00000559218 PGK1P00558 417 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 ADD2P35612 726 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 KIF1BPQ96EK5 621 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 MMP19Q99542 508 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 BOLA2Q9H3K6 86 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 XPNPEP3Q9NQH7 507 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 ATP8A2Q9NTI2 1148 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 PAG1Q9NWQ8 432 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 MUC3AQ02505 3323 aa10.42□□□□□ -0.74
CLPX-205ENST00000559218 VWA5AO00534 786 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 SLC25A27O95847 323 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 RARBP10826 455 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
CLPX-205ENST00000559218 SMAD3P84022 425 aaKnown RBP10.41□□□□□ -0.74
CLPX-205ENST00000559218 ZNF792Q3KQV3 632 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 RIOX2Q8IUF8 465 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 REPS2Q8NFH8 660 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 MAFAQ8NHW3 353 aaPredicted RBP10.41□□□□□ -0.74
CLPX-205ENST00000559218 MYLIPQ8WY64 445 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 CCDC17Q96LX7 622 aa10.41□□□□□ -0.74
CLPX-205ENST00000559218 NUP88Q99567 741 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms