RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
SNX1-204ENST00000559061 SLFN13Q68D06 897 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 ATG4CQ96DT6 458 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 SH2D4AQ9H788 454 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
SNX1-204ENST00000559061 PDHBP11177 359 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
SNX1-204ENST00000559061 CPA1P15085 419 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 OSBPP22059 807 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 MCCP23508 829 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 DSG3P32926 999 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 NT5C2P49902 561 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 IRX3P78415 501 aaPredicted RBP13.47□□□□□ -0.25
SNX1-204ENST00000559061 SP3Q02447 781 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 FAM110CQ1W6H9 321 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 SLC35G1Q2M3R5 365 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 TTBK2Q6IQ55 1244 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 DGKHQ86XP1 1220 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 TRIM47Q96LD4 638 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 TTC14Q96N46 770 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 PNMA3Q9UL41 463 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 CENPFP49454 3210 aa13.47□□□□□ -0.25
SNX1-204ENST00000559061 REC8O95072 547 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 EXOSC10Q01780 885 aaKnown RBP13.46□□□□□ -0.25
SNX1-204ENST00000559061 PABPC4Q13310 644 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX1-204ENST00000559061 KCTD1Q719H9 257 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 SMCR8Q8TEV9 937 aaPredicted RBP13.46□□□□□ -0.25
SNX1-204ENST00000559061 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 LRRC2Q9BYS8 371 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 PORCNQ9H237 461 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 LY9Q9HBG7 655 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 PPP1R9AQ9ULJ8 1098 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 LCTP09848 1927 aa13.46□□□□□ -0.25
SNX1-204ENST00000559061 ZNF236Q9UL36 1845 aa13.46□□□□□ -0.26
SNX1-204ENST00000559061 FRMPD2Q68DX3 1309 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 MYPNQ86TC9 1320 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 PRC1O43663 620 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 RAD21O60216 631 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 FLOT1O75955 427 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 BMP3P12645 472 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 TAL1P17542 331 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 ERVK-24P63145 666 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 COG2Q14746 738 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 TMEM132BQ14DG7 1078 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 OTOP1Q7RTM1 612 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 IQCA1Q86XH1 822 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 ZNF214Q9UL59 606 aaPredicted RBP13.45□□□□□ -0.26
SNX1-204ENST00000559061 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
SNX1-204ENST00000559061 ZNF536O15090 1300 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 VWA5AO00534 786 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 ZNF543Q08ER8 600 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 BTNL9Q6UXG8 535 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 RALYLQ86SE5 291 aaKnown RBP13.44□□□□□ -0.26
SNX1-204ENST00000559061 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 DCAF4Q8WV16 495 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 SLF1Q9BQI6 1058 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 PAGR1Q9BTK6 254 aa13.44□□□□□ -0.26
SNX1-204ENST00000559061 TMEM232C9JQI7 657 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 IFIT3O14879 490 aaKnown RBP13.43□□□□□ -0.26
SNX1-204ENST00000559061 PLA2G6O60733 806 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 SLC1A4P43007 532 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 SNAP25P60880 206 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 TROAPQ12815 778 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 TRDNQ13061 729 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 STAG2Q8N3U4 1231 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 UBAC1Q9BSL1 405 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 EFCC1Q9HA90 598 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 GABRQQ9UN88 632 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 BRCA2P51587 3418 aa13.43□□□□□ -0.26
SNX1-204ENST00000559061 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 MCM5P33992 734 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 SLC16A2P36021 539 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 PSMC4P43686 418 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
SNX1-204ENST00000559061 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
SNX1-204ENST00000559061 GPRC5AQ8NFJ5 357 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 ERO1AQ96HE7 468 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 JAKMIP1Q96N16 626 aaKnown RBP13.42□□□□□ -0.26
SNX1-204ENST00000559061 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
SNX1-204ENST00000559061 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
SNX1-204ENST00000559061 GPCPD1Q9NPB8 672 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms