RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MYH4Q9Y623 1939 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 SPTLC2O15270 562 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
SMAD3-207ENST00000558763 SLURP2P0DP57 97 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 TNFAIP1Q13829 316 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 SLC39A14Q15043 492 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 ADALQ6DHV7 355 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 FAM83AQ86UY5 434 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 TNFRSF25Q93038 417 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 NUP62CLQ9H1M0 184 aa14.94□□□□□ -0.02
SMAD3-207ENST00000558763 PALM3A6NDB9 673 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 CYTH3O43739 400 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 HLA-DOAP06340 250 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 AKR1B1P15121 316 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 ME1P48163 572 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 STK38Q15208 465 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 SF3A1Q15459 793 aaKnown RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 APOBEC3FQ8IUX4 373 aaKnown RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 CCAR1Q8IX12 1150 aaKnown RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 DEFB129Q9H1M3 183 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 EHD4Q9H223 541 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 SERPINB13Q9UIV8 391 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 COL2A1P02458 1487 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 FAM196BA6NMK8 535 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 KIF5BP33176 963 aa14.93□□□□□ -0.02
SMAD3-207ENST00000558763 PFKFB3Q16875 520 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 EARS2Q5JPH6 523 aaKnown RBP14.93□□□□□ -0.02
SMAD3-207ENST00000558763 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 ADAMTS3O15072 1205 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 SCG2P13521 617 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 CAMK4Q16566 473 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 PNMA8AQ86V59 439 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-207ENST00000558763 DCPSQ96C86 337 aaKnown RBP14.92□□□□□ -0.02
SMAD3-207ENST00000558763 MTMR4Q9NYA4 1195 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 SWAP70Q9UH65 585 aa14.92□□□□□ -0.02
SMAD3-207ENST00000558763 POLR2AP24928 1970 aaKnown RBP14.92□□□□□ -0.02
SMAD3-207ENST00000558763 AKAP17AQ02040 695 aaKnown RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 SAFBQ15424 915 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 PRAMEF18Q5VWM3 479 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 CLEC10AQ8IUN9 316 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 FMR1NBQ8N0W7 255 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 FSIP1Q8NA03 581 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 PI4KBQ9UBF8 816 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 PITPNM2Q9BZ72 1349 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 PPP6R2O75170 966 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 TOP1P11387 765 aaKnown RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 GNL2Q13823 731 aaKnown RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 TYW1BQ6NUM6 668 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 DLK2Q6UY11 383 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 RNF214Q8ND24 703 aa14.91□□□□□ -0.02
SMAD3-207ENST00000558763 MRPS27Q92552 414 aaKnown RBP14.91□□□□□ -0.02
SMAD3-207ENST00000558763 ADM5C9JUS6 153 aa14.9□□□□□ -0.02
SMAD3-207ENST00000558763 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
SMAD3-207ENST00000558763 SULF1Q8IWU6 871 aa14.9□□□□□ -0.02
SMAD3-207ENST00000558763 TEPSINQ96N21 525 aa14.9□□□□□ -0.02
SMAD3-207ENST00000558763 TRIM34Q9BYJ4 488 aa14.9□□□□□ -0.02
SMAD3-207ENST00000558763 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
SMAD3-207ENST00000558763 WNT7AO00755 349 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 SNHG28P0DPA3 235 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-207ENST00000558763 NDUFA8P51970 172 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 RILPL1Q5EBL4 403 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 KRT26Q7Z3Y9 468 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
SMAD3-207ENST00000558763 CKAP2LQ8IYA6 745 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 SPZ1Q9BXG8 430 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 FAM237AA0A1B0GTK4 181 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 A0A1B0GVL5 298 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 GOLGA8HP0CJ92 632 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 XBP1P17861 261 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 KRT2P35908 639 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 GNAQP50148 359 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 SHROOM1Q2M3G4 852 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-207ENST00000558763 NBPF12Q5TAG4 269 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-207ENST00000558763 SHC4Q6S5L8 630 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 MIGA2Q7L4E1 593 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 ZC3H15Q8WU90 426 aaKnown RBP14.89□□□□□ -0.03
SMAD3-207ENST00000558763 CPVLQ9H3G5 476 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 PGAP2Q9UHJ9 254 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 PCDHB6Q9Y5E3 794 aa14.89□□□□□ -0.03
SMAD3-207ENST00000558763 PDHBP11177 359 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 CMA1P23946 247 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 USP17L2Q6R6M4 530 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 CCDC73Q6ZRK6 1079 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 PPP1R9BQ96SB3 815 aa14.88□□□□□ -0.03
SMAD3-207ENST00000558763 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms