RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 LBX2Q6XYB7 198 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 SH3TC2Q8TF17 1288 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 TMEM47Q9BQJ4 181 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 ZSWIM5Q9P217 1185 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 U3KPZ7 1027 aaPredicted RBP16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
TSPAN3-205ENST00000558745 RLFQ13129 1914 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 HOXD10P28358 340 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 NOVP48745 357 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 FLT3LGP49771 235 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 RCSD1Q6JBY9 416 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 ESR2Q92731 530 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 ISY1Q9ULR0 285 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 MGAMO43451 1857 aa16.32■□□□□ 0.2
TSPAN3-205ENST00000558745 CDC45O75419 566 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 PLS1Q14651 629 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 HABP4Q5JVS0 413 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 WDR78Q5VTH9 848 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 KCTD1Q719H9 257 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 CYB5R4Q7L1T6 521 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 RAET1EQ8TD07 263 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 COA7Q96BR5 231 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
TSPAN3-205ENST00000558745 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 GNRH1P01148 92 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 BMP3P12645 472 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 GPR142Q7Z601 462 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 MOV10L1Q9BXT6 1211 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-205ENST00000558745 E7EWF7 191 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 VWA5AO00534 786 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 PCP11498 1178 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 ELNP15502 786 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 CYP2B6P20813 491 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 SLC1A4P43007 532 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 SNAP25P60880 206 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 SLF1Q9BQI6 1058 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 KRT23Q9C075 422 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 ADAMTS5Q9UNA0 930 aa16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-205ENST00000558745 LAMA4Q16363 1823 aa16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 PRMT2P55345 433 aa16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 ZSCAN10Q96SZ4 725 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-205ENST00000558745 SLC27A2O14975 620 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 ADCY3O60266 1144 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 ERCC3P19447 782 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 MAPK4P31152 587 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 SLC16A2P36021 539 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 NECTIN1Q15223 517 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 PRPF38AQ8NAV1 312 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 TTC14Q96N46 770 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 SENP2Q9HC62 589 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 GPCPD1Q9NPB8 672 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 FEM1BQ9UK73 627 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 SYNPO2Q9UMS6 1093 aa16.27■□□□□ 0.2
TSPAN3-205ENST00000558745 GOLGA8HP0CJ92 632 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 GRK4P32298 578 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 STAT3P40763 770 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 CCNA1P78396 465 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 TRIM32Q13049 653 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 MTFR1Q15390 333 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 CASC1Q6TDU7 716 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 IQCA1Q86XH1 822 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 DGKHQ86XP1 1220 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 ENAHQ8N8S7 591 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 ARMC5Q96C12 935 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 CNNM2Q9H8M5 875 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 RAVER2Q9HCJ3 691 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 RIPK3Q9Y572 518 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
TSPAN3-205ENST00000558745 TNKSO95271 1327 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms