RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 PI4K2BG5E9Z4 385 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 LDHCP07864 332 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 ZNF865P0CJ78 1059 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-206ENST00000558739 MCAMP43121 646 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 TFCP2Q12800 502 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 PLS1Q14651 629 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 KCNA10Q16322 511 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 CCSAPQ6IQ19 270 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-206ENST00000558739 NCAPG2Q86XI2 1143 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-206ENST00000558739 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
SMAD3-206ENST00000558739 ANKS1AQ92625 1134 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 GINM1Q9NU53 330 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 RIF1Q5UIP0 2472 aaKnown RBP14.65□□□□□ -0.06
SMAD3-206ENST00000558739 ZNF521Q96K83 1311 aa14.65□□□□□ -0.06
SMAD3-206ENST00000558739 ADCY6O43306 1168 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 STRNO43815 780 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 ARHGEF15O94989 841 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 GUCY1A2P33402 732 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 USP14P54578 494 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 SPRED2Q7Z698 418 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 WDR63Q8IWG1 891 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 TMEM199Q8N511 208 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 SHCBP1Q8NEM2 672 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 TANGO6Q9C0B7 1094 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 IL23AQ9NPF7 189 aa14.64□□□□□ -0.07
SMAD3-206ENST00000558739 EPG5Q9HCE0 2579 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 PTPRZ1P23471 2315 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-206ENST00000558739 CDK7P50613 346 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 DYNLL1P63167 89 aaKnown RBP14.63□□□□□ -0.07
SMAD3-206ENST00000558739 EVX2Q03828 476 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 TATDN1Q6P1N9 297 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 CCDC174Q6PII3 467 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 FAM126BQ8IXS8 530 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 KLHDC9Q8NEP7 349 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 VWCEQ96DN2 955 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 ATG4CQ96DT6 458 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 FBXL18Q96ME1 805 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 UIMC1Q96RL1 719 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 TINF2Q9BSI4 451 aa14.63□□□□□ -0.07
SMAD3-206ENST00000558739 A0A1W2PRG0 241 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 PRR33A8MZF0 331 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 AKR1A1P14550 325 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 MVPQ14764 893 aaKnown RBP14.62□□□□□ -0.07
SMAD3-206ENST00000558739 SAMD1Q6SPF0 538 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-206ENST00000558739 PHOX2BQ99453 314 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 LRP2BPQ9P2M1 347 aa14.62□□□□□ -0.07
SMAD3-206ENST00000558739 HLA-DOAP06340 250 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 CA3P07451 260 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 ARID4AP29374 1257 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-206ENST00000558739 ABCB5Q2M3G0 1257 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 NAA16Q6N069 864 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-206ENST00000558739 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 NEUROD6Q96NK8 337 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 TSEN34Q9BSV6 310 aaKnown RBP14.61□□□□□ -0.07
SMAD3-206ENST00000558739 COPRSQ9NQ92 184 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
SMAD3-206ENST00000558739 MOXD2PA6NHM9 499 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 FGBP02675 491 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 FCER1AP12319 257 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 SHMT1P34896 483 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 CCL23P55773 120 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 PPP4CP60510 307 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 COG2Q14746 738 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 SEPT2Q15019 361 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 ZNF792Q3KQV3 632 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 ABRAQ8N0Z2 381 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 HLA-CQ95604 372 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 NOL10Q9BSC4 688 aaKnown RBP14.6□□□□□ -0.07
SMAD3-206ENST00000558739 WNT8AQ9H1J5 351 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 MROH8Q9H579 483 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 NRBP1Q9UHY1 535 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 COG5Q9UP83 839 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 PCDHA11Q9Y5I1 949 aa14.6□□□□□ -0.07
SMAD3-206ENST00000558739 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-206ENST00000558739 BAG3O95817 575 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 ASGR1P07306 291 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-206ENST00000558739 POU3F3P20264 500 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-206ENST00000558739 TMEM132BQ14DG7 1078 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 SPICE1Q8N0Z3 855 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 GLT1D1Q96MS3 346 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 MMP19Q99542 508 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 PTPRCP08575 1304 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 MROH7Q68CQ1 1323 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 CACNA1BQ00975 2339 aa14.59□□□□□ -0.07
SMAD3-206ENST00000558739 ZBBXA8MT70 800 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 RBAK-RBAKDNI3L0D1 243 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 ARVCFO00192 962 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 CD4P01730 458 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 C6orf222P0C671 652 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-206ENST00000558739 ATP2A2P16615 1042 aaKnown RBP14.58□□□□□ -0.08
SMAD3-206ENST00000558739 PLCG2P16885 1265 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 DSG3P32926 999 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
SMAD3-206ENST00000558739 CERKLQ49MI3 558 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms